Return to main results Retrieve Phyre Job Id

Job DescriptionP37908
Confidence99.94%DateThu Jan 5 11:57:46 GMT 2012
Rank4Aligned Residues134
% Identity18%Templatec3ocoB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:hemolysin-like protein containing cbs domains; PDBTitle: the crystal structure of a hemolysin-like protein containing cbs2 domain of oenococcus oeni psu
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230.........240.. .......250.........260.........
Predicted Secondary structure 
















.










Query SS confidence 



















































.


























Query Sequence  DMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYR. DSLDDAISMLRVREAWRLMSEKKEFTK
Query Conservation    
  

 
    
  




  
  
       
          

 

  .   
 




  



           
Alig confidence 



















































.


























Template Conservation        
      
 


 
   
  
    

 

   
     
  

        
 
                   
Template Sequence  NFXQRAFEXNDKVASDVXVDRTSXSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDKAKI
Template Known Secondary structure 
T
BSTTT


TTSB

STTTTSBG
Template Predicted Secondary structure 





























Template SS confidence 















































































   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   270.........280.........290.........300.........310.........320.......
Predicted Secondary structure 


















Query SS confidence 

























































Query Sequence  ETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVG
Query Conservation              

    
   
  
       





 
   



 








Alig confidence 

...




















































Template Conservation    ...                              



 
   



  



 


Template Sequence  ST. . . IXRDIVSVPENXKVPDVXEEXSAHRVPXAIVIDEYGGTSGIITDKDVYEELFG
Template Known Secondary structure  GG...T
B

TT
BTT
S

TTS

T
Template Predicted Secondary structure  ...














Template SS confidence 

























































   292. ......300.........310.........320.........330.........340......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions