Return to main results Retrieve Phyre Job Id

Job DescriptionP62554
Confidence100.00%DateThu Jan 5 12:07:36 GMT 2012
Rank1Aligned Residues101
% Identity100%Templated3vuba_
SCOP infoSH3-like barrel Cell growth inhibitor/plasmid maintenance toxic component CcdB
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEV
Query Conservation   




 
      

 








 
 






             
 
   
 
   

 
  




   

  
Alig confidence 















































































Template Conservation   




 
      

 








 
 






             
 
   
 
   

 
  




   

  
Template Sequence  MQFKVYTYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDKVSRELYPVVHIGDESWRMMTTDMASVPVSVIGEEV
Template Known Secondary structure 
TTSS

S
S
S
TT


TTSSSS
SSS
TTTS
TT
GGG
GGG
Template Predicted Secondary structure 




































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.
Predicted Secondary structure 



Query SS confidence 




















Query Sequence  ADLSHRENDIKNAINLMFWGI
Query Conservation 



  

 

 


 
  

Alig confidence 




















Template Conservation 



  

 

 


 
  

Template Sequence  ADLSHRENDIKNAINLMFWGI
Template Known Secondary structure 
GGG

Template Predicted Secondary structure 



Template SS confidence 




















   81........90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions