Return to main results Retrieve Phyre Job Id

Job DescriptionP62554
Confidence89.85%DateThu Jan 5 12:07:36 GMT 2012
Rank5Aligned Residues91
% Identity11%Templated1ne8a_
SCOP infoSH3-like barrel Cell growth inhibitor/plasmid maintenance toxic component Kid/PemK
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20....... ..30.........40.........50........ .60.........70.....
Predicted Secondary structure 













.











......




Query SS confidence 
























.






























. . . . . .
















Query Sequence  FKVYTYKRESRYRLFVDVQSDIIDT. PGRRMVIPLASARLLSDKVSRELYPVVHIGD. . . . . . ESWRMMTTDMASVPVSV
Query Conservation 



 
      

 








 .
 






             
 
   
 
......   

 
  




   
Alig confidence 
























.









.....















......
















Template Conservation       
 
  
 

 



          
 
 


.....
                  

   
 
   

 

   
Template Sequence  LSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAIT. . . . . AQIQKAKLPTHVEIDAKRYGFERDSVILLEQIRTIDKQR
Template Known Secondary structure 

S

TTS

S
S

S.....SS
SS
SSTT
T
SS
GGG
Template Predicted Secondary structure 






















.....



















Template SS confidence 















































































   13......20.........30.........40........ .50.........60.........70.........80.......
 
   76...80....... ..90........
Predicted Secondary structure 





.
Query SS confidence 











.










Query Sequence  IGEEVADLSHRE. NDIKNAINLMF
Query Conservation 

  




  
.
 

 


 
 
Alig confidence 











.










Template Conservation 
    
 
    
  
   
   
Template Sequence  LTDKITHLDDEMMDKVDEALQISL
Template Known Secondary structure 

T
Template Predicted Secondary structure 




Template SS confidence 























   88.90.........100.........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions