Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 36 Aligned Residues 160 % Identity 18% Template d2ozlb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																				.	.	.	.									.																																	.
Query SS confidence																																				.	.	.	.									.																																	.
Query Sequence		L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	.	.	.	.	M	V	E	F	S	R	K	F	.	P	D	R	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	Y	K	P	I	V	A	I	.
Query Conservation																																				.	.	.	.									.																																	.
Alig confidence																																				.	.	.	.									.																																	.
Template Conservation
Template Sequence		Q	V	T	V	R	D	A	I	N	Q	G	M	D	E	E	L	E	R	D	E	K	V	F	L	L	G	E	E	V	A	Q	Y	D	G	A	Y	K	V	S	R	G	L	W	K	K	Y	G	D	K	R	I	I	D	T	P	I	S	E	M	G	F	A	G	I	A	V	G	A	A	M	A	G	L	R	P	I	C	E	F	M
Template Known Secondary structure																					T	T						T	T	S	S	T	T			T	T	S	T	T	T	T							T	T	T						S															T	T								S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	.	.	.	.	.	.	K	L	P	V	L	F	A	I	D	R	A	G	I	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V	I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G	Y
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	N	F	S	M	Q	A	I	D	Q	V	I	N	S	A	A	K	T	Y	Y	M	S	G	G	L	Q	P	V	P	I	V	F	R	G	P	N	G	A	S	A	G	V	A	A	Q	H	S	Q	C	F	A	A	W	Y	G	H	C	P	G	L	K	V	V	S	P	W	N	S	E	D	A	K	G	L	I	K	S	A	I
Template Known Secondary structure		S	G	G	G	G	G	G	G						T	T	T	T	T					T	T	S	S												S			S	S			G	G	G										T	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		466	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	N	D	G	P	S	A	V	R	Y	P	R
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		R	D	.	N	N	P	V	V	V	L	E	N	E
Template Known Secondary structure			S	.	S	S
Template Predicted Secondary structure				.
Template SS confidence
		162	.		.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions