Job Description P77488 Confidence 99.98% Date Thu Jan 5 12:29:48 GMT 2012 Rank 40 Aligned Residues 264 % Identity 20% Template d2ozla1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.
Query Sequence		F	D	I	A	K	Y	P	T	L	A	L	V	D	S	T	Q	E	L	R	L	L	P	K	E	S	L	P	K	L	C	D	E	L	.	.	.	.	.	.	.	.	R	R	Y	L	L	D	S	V	S	R	S	S	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q	L
Query Conservation																																			.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.																																		.
Template Conservation																																																																												.
Template Sequence		F	E	I	K	K	C	D	L	H	R	L	E	E	G	P	P	V	T	T	V	L	T	R	E	D	G	L	K	Y	Y	R	M	M	Q	T	V	R	R	M	E	L	K	A	D	Q	L	Y	K	Q	K	I	I	R	G	F	C	H	L	C	D	G	Q	E	A	C	C	V	G	L	E	A	G	I	N	.	P	T	D	H	L
Template Known Secondary structure											S		S			S		S																																T	T	S	S		S						T	T											T	S		.	T	T	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.								.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																			.																							.	.	.	.	.	.	.
Query SS confidence																			.																							.	.	.	.	.	.	.
Query Sequence		I	W	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	.	R	D	K	I	G	T	I	R	Q	K	G	G	L	H	P	F	P	W	R	G	E	S	.	.	.	.	.	.	.	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T
Query Conservation																			.																							.	.	.	.	.	.	.
Alig confidence			.	.															.					.	.																	.	.	.	.	.	.	.
Template Conservation			.	.																				.	.
Template Sequence		I	.	.	T	A	Y	R	A	H	G	F	T	F	T	R	G	L	S	V	R	E	I	.	.	L	A	E	L	T	G	R	K	G	G	C	A	K	G	K	G	G	S	M	H	M	Y	A	K	N	F	Y	G	G	N	G	I	V	G	A	Q	V	P	L	G	A	G	I	A	L	A	C	K	Y	N	G	K	D	E	V	C
Template Known Secondary structure			.	.			S									T	T							.	.					T	T		T	T	S	T	T	T	T	S	S		T	T				B	T	T	B						S	T	T	T																T
Template Predicted Secondary structure			.	.																				.	.
Template SS confidence
		86			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	L	Y	G	D	G	A	A	N	Q	G	Q	I	F	E	A	Y	N	M	A	A	L	W	K	L	P	C	I	F	I	C	E	N	N	R	Y	G	M	G	T	S	V	E	R	A	A	A	S	T	D	Y	Y	K	R	G	D	F	I	P	G	L	R	V	D	G	M	D	I	L	C	V	R	E	A	T	R	F	A	A
Template Known Secondary structure							T	T	G	G	G														T	T											S			T	T								S				G	G	G	T	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	C	R	S	G	K	G	P	I	L	M	E	L	Q	T	Y	R	Y	H	G	H	E	M	S	D	P	G	V	S	Y	R	T	R	E	E	I	Q	E	V	R	S	K	S	D
Template Known Secondary structure						T	T													S	S		S	S	T	T			S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions