Job Description P77488 Confidence 99.27% Date Thu Jan 5 12:29:48 GMT 2012 Rank 61 Aligned Residues 169 % Identity 10% Template d2ji7a3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.82

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.
Predicted Secondary structure																													.																																													.
Query SS confidence																													.																																													.
Query Sequence		F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q	L	I	W	.	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	R	D	K	I	G	T	I	R	Q	K	G	G	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	.	G	H	S	S	T	S	I
Query Conservation																													.																																													.
Alig confidence																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	G	M	M	N	Y	S	N	S	L	G	V	V	R	D	F	M	L	A	N	P	D	I	S	L	V	N	E	G	A	N	A	L	D	N	T	R	M	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	L	K	P	R	K	R	L	D	S	G	T	W	G	V	M	G	I	G	M
Template Known Secondary structure			T	T		B																		S	S						S	S										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T						T	T	T	T		T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.																			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.												.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	.	.	.	.	.	.	.	.	.	.	.	M	S	I	S	E	N	V	G	A	L	N	N	H	L
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.																			.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																			.	.
Template Sequence		G	Y	C	V	A	A	A	A	V	.	.	.	.	.	T	G	K	P	V	I	A	V	E	G	D	S	A	F	G	F	S	G	.	.	M	E	L	E	T	I	C	R	Y	N	L	P	V	T	V	I	I	M	N	N	G	G	I	Y	K	G	N	E	A	D	P	Q	P	G	V	I	S	C	T	R	L	T	R	G	R	Y
Template Known Secondary structure											.	.	.	.	.			S													T	T	G	.	.	G	G							T	T											S	B	S	S		S					S	B	T	T	B			T	T	B
Template Predicted Secondary structure											.	.	.	.	.																			.	.
Template SS confidence
		433	.	.	.	.	.	.	440	.						.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.			460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	K	G	P	Q
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	M	M	M	E	A	F	G	G	K	G	Y	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	P	A	E	L	K	A	A	L	E	E	A	V	A	S	G	K	P	C
Template Known Secondary structure								T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S															T	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.																																															520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	H	I	M	T	K	K	G	R	G	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	N	A	M	I	D	P	D	A	G	V	E
Template Known Secondary structure							B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions