Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 20 Aligned Residues 308 % Identity 19% Template d2ieaa2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																					.	.	.	.	.																.	.	.
Query SS confidence																										.	.	.	.	.	.	.																					.	.	.	.	.																.	.	.
Query Sequence		P	K	E	S	L	P	K	L	C	D	E	L	R	R	Y	L	L	D	S	V	S	R	S	S	.	.	.	.	.	.	.	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	.	.	.	.	.	N	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	.	.	.	Y	P	H	K	I	L
Query Conservation																										.	.	.	.	.	.	.																					.	.	.	.	.																.	.	.
Alig confidence																										.	.	.	.	.	.	.																					.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		N	L	E	L	E	R	R	I	R	S	A	I	R	W	N	A	I	M	T	V	L	R	A	S	K	K	D	L	E	L	G	G	H	M	A	S	F	Q	S	S	A	T	I	Y	D	V	C	F	N	H	F	F	R	A	R	N	E	Q	D	G	G	D	L	V	Y	F	Q	G	H	I	S	P	G	V	Y	A	R	A	F	L
Template Known Secondary structure																											T		S																							T						S	S	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		89	90	.			.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure					.	.													.	.	.													.																											.	.	.	.	.	.	.
Query SS confidence					.	.													.	.	.													.																											.	.	.	.	.	.	.
Query Sequence		T	G	R	.	.	R	D	K	I	G	T	I	R	Q	K	G	G	.	.	.	L	H	P	F	P	W	R	G	E	S	E	Y	.	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	.	.	.	.	.	.	.	K	N	R	R	T	V	C	V	I	G	D	G	A	I
Query Conservation					.	.													.	.	.													.																											.	.	.	.	.	.	.
Alig confidence					.	.													.	.	.													.																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	R	L	T	Q	E	Q	L	D	N	F	R	Q	E	V	H	G	N	G	L	S	S	Y	P	H	P	K	L	M	P	E	F	W	Q	F	P	T	V	S	M	G	L	G	P	I	G	A	I	Y	Q	A	K	F	L	K	Y	L	E	H	R	G	L	K	D	T	S	K	Q	T	V	Y	A	F	L	G	D	G	E	M
Template Known Secondary structure		T	T	S	S						T	T	B	T			T	T	S	S		B		S	S			T	T	T	S	T	T	T							S	T	T																			T	T	S				T	T									T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																							.																			.	.	.																														.	.	.	.	.	.	.	.
Query SS confidence																							.																			.	.	.																														.	.	.	.	.	.	.	.
Query Sequence		T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	.	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	.	.	.	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	.	.	.	.	.	.	.	.
Query Conservation																							.																			.	.	.																														.	.	.	.	.	.	.	.
Alig confidence																							.																			.	.	.																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	P	E	S	K	G	A	I	T	I	A	T	R	E	K	L	D	N	L	V	F	V	I	N	C	N	L	Q	R	L	D	G	P	V	T	G	N	G	K	I	I	N	E	L	E	G	I	F	E	G	A	G	W	N	V	I	K	V	M	W	G	S	R	W	D	E	L	L	R	K	D	T	S	G	K	L	I	Q	L
Template Known Secondary structure		G	S					T	T							T	T		T	T									S	B		S	S	S	B	S		T	T	S													T	T								B		G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
																			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	K	G	.	P	Q	F	L	H	I	M	T	K	K	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation
Template Sequence		M	N	E	T	V	D	G	D	Y	Q	T	F	K	S	K	D	G	A	Y	V	R	E	H	F	F	G	K	Y	P	E	T	A	A	L	V	A	D	W	T	D	E	Q	I	W	A	L	N	R	G	G	H	D	P	K	K	I	Y	A	A	F	K	K	A	Q	E	T	K	G	K	A	T	V	I	L	A	H	T	I	K	G
Template Known Secondary structure														T	T	S									T	G	G	G	S					T	T	S	T	T	S						T	T			B	G	G	G																	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		R	G	Y	E	P	A	E	K	D	P	I	T	F	.	.	.	.	H	A	V	P	K	F	D	P	S	S	G	C	L	P	K	S	S	G	G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		Y	G	M	G	D	A	A	M	D	G	V	R	H	I	R	D	R	F	N	V	P	V	S	D	A	D	I	E	K	L	P	Y	I	T	F	P	E	G	S	E	E	H	T	Y	L	H	A	Q	R	Q
Template Known Secondary structure		T	T		T	T													T	T		S							T	T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions