Job Description P77488 Confidence 99.96% Date Thu Jan 5 12:29:48 GMT 2012 Rank 43 Aligned Residues 242 % Identity 20% Template d2bfda1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.39

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		4	.	.	.	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.																							.	.	.									.															.	.
Query SS confidence												.	.	.																							.	.	.									.															.	.
Query Sequence		D	I	A	K	Y	P	T	L	A	L	.	.	.	V	D	S	T	Q	E	L	R	L	L	P	K	E	S	L	P	K	L	C	D	E	L	.	.	.	R	R	Y	L	L	D	S	V	.	S	R	S	S	G	H	F	A	S	G	L	G	T	V	.	.	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q	L
Query Conservation												.	.	.																							.	.	.									.															.	.
Alig confidence												.	.	.																							.	.	.									.															.	.
Template Conservation
Template Sequence		G	I	P	I	Y	R	V	M	D	R	Q	G	Q	I	I	N	P	S	E	D	P	H	L	P	K	E	K	V	L	K	L	Y	K	S	M	T	L	L	N	T	M	D	R	I	L	Y	E	S	Q	R	Q	G	R	I	S	F	Y	M	T	N	Y	G	E	E	G	T	H	V	G	S	A	A	A	L	D	N	T	D	L	V
Template Known Secondary structure			S					S	B		T	T	S		B	S		G	G	G																																T	T	S	S	S						T	T											T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																			.	.													.	.	.	.	.	.	.
Query SS confidence																			.	.													.	.	.	.	.	.	.
Query Sequence		I	W	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	.	.	R	D	K	I	G	T	I	R	Q	K	G	G	.	.	.	.	.	.	.	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R
Query Conservation																			.	.													.	.	.	.	.	.	.
Alig confidence			.	.															.	.													.	.	.	.	.	.	.							.
Template Conservation			.	.																																										.
Template Sequence		F	.	.	G	Q	A	R	E	A	G	V	L	M	Y	R	D	Y	P	L	E	L	F	M	A	Q	C	Y	G	N	I	S	D	L	G	K	G	R	Q	M	P	V	H	Y	G	.	C	K	E	R	H	F	V	T	I	S	S	P	L	A	T	Q	I	P	Q	A	V	G	A	A	Y	A	A	K	R	A	N	A	N	R	V
Template Known Secondary structure			.	.			S									T	T												T		T	T		T	T	T	T		S		S	S				.	B	T	T	T	T	B					S	S	T	T	T																T
Template Predicted Secondary structure			.	.																																										.
Template SS confidence
		110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	.	.	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		V	I	C	Y	F	G	E	G	A	A	S	E	G	D	A	H	A	G	F	N	F	A	A	T	L	E	C	P	I	I	F	F	C	R	N	N	G	Y	A	I	S	T	P	T	S	E	Q	Y	R	G	D	G	I	A	A	R	G	P	G	Y	G	I	M	S	I	R	V	D	G	N	D	V	F	A	V	Y	N	A	T	K
Template Known Secondary structure								T	T	G	G	G	S													T	T											S			T	T			G	G	G	T		S	S	S	T	T	G	G	G	T	G	G	G	T								T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	R	R	R	A	V	A	E	N	Q	P	F	L	I	E	A	M	T	Y	R	I	G	S	T
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions