Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 39 Aligned Residues 241 % Identity 18% Template d1w85a_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 2.0

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		4	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.			.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure											.	.	.																							.	.	.					.	.										.	.
Query SS confidence											.	.	.																							.	.	.					.	.										.	.
Query Sequence		D	I	A	K	Y	P	T	L	A	.	.	.	L	V	D	S	T	Q	E	L	R	L	L	P	K	E	S	L	P	K	L	C	D	E	.	.	.	L	R	R	Y	.	.	L	L	D	S	V	S	R	S	S	.	.	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q
Query Conservation											.	.	.																							.	.	.					.	.										.	.
Alig confidence											.	.	.																							.	.	.					.	.										.	.																						.
Template Conservation																																																																													.
Template Sequence		Q	F	P	T	F	Q	I	L	N	E	E	G	E	V	V	N	E	E	A	M	P	E	L	S	D	E	Q	L	K	E	L	M	R	R	M	V	Y	T	R	I	L	D	Q	R	S	I	S	L	N	R	Q	G	R	L	G	F	Y	A	P	T	A	G	Q	E	A	S	Q	I	A	S	H	F	A	L	E	.	K	E	D	F
Template Known Secondary structure		T						S	B		T	T	S		B	S		G	G	G																																T	T	S			S					T	T											T			.	T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	W	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	R	D	K	I	G	T	I	R	Q	K	G	G	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G
Query Conservation
Alig confidence				.	.														.
Template Conservation				.	.														.
Template Sequence		I	L	.	.	P	G	Y	R	D	V	P	Q	I	I	W	H	G	.	L	P	L	Y	Q	A	F	L	F	S	R	G	H	F	H	G	N	Q	I	P	E	G	V	N	V	L	P	P	Q	I	I	I	G	A	Q	Y	I	Q	A	A	G	V	A	L	G	L	K	M	R	G	K	K	A	V	A	I	T	Y	T	G	D	G
Template Known Secondary structure				.	.			S	S								T	T	.												T		G	G	G	G				T	T			B						S	T	T																T	T		S									T	G
Template Predicted Secondary structure				.	.														.
Template SS confidence
		98	.			100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	.	.	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		G	T	S	Q	G	D	F	Y	E	G	I	N	F	A	G	A	F	K	A	P	A	I	F	V	V	Q	N	N	R	F	A	I	S	T	P	V	E	K	Q	T	V	A	K	T	L	A	Q	K	A	V	A	A	G	I	P	G	I	Q	V	D	G	M	D	P	L	A	V	Y	A	A	V	K	A	A	R	E	R	A	I	N
Template Known Secondary structure		G	G	G	S													T	T											S			T	T			G	G	G	T		S		S		S	G	G	G	G	G	G	T	T								T	T																		T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	G	P	T	L	I	E	T	L	C	F	R	Y	G	P	H
Template Known Secondary structure		T	S												S	S		S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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