Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 37 Aligned Residues 179 % Identity 17% Template d1qs0b1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 2.40

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																					.	.	.	.									.
Query SS confidence																																					.	.	.	.									.
Query Sequence		G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	.	.	.	.	M	V	E	F	S	R	K	F	.	P	D	R	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	Y	K	P	I	V	A	I
Query Conservation																																					.	.	.	.									.
Alig confidence																																					.	.	.	.									.
Template Conservation
Template Sequence		T	T	X	T	X	I	Q	A	L	R	S	A	X	D	V	X	L	E	R	D	D	N	V	V	V	Y	G	Q	D	V	G	Y	F	G	G	V	F	R	C	T	E	G	L	Q	T	K	Y	G	K	S	R	V	F	D	A	P	I	S	E	S	G	I	V	G	T	A	V	G	X	G	A	Y	G	L	R	P	V	V	E	I
Template Known Secondary structure																						T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S																T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
			392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.																				.	.	.	.	.	.
Query SS confidence		.																				.	.	.	.	.	.
Query Sequence		.	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	.	.	.	.	.	.	K	L	P	V	L	F	A	I	D	R	A	G	I	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V	I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G
Query Conservation		.																				.	.	.	.	.	.
Alig confidence		.																				.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	A	D	Y	F	Y	P	A	S	D	Q	I	V	S	E	X	A	R	L	R	Y	R	S	A	G	E	F	I	A	P	L	T	L	R	X	P	C	G	G	G	I	Y	G	G	Q	T	H	S	Q	S	P	E	A	X	F	T	Q	V	C	G	L	R	T	V	X	P	S	N	P	Y	D	A	K	G	L	L	I	A	S
Template Known Secondary structure		S		G	G	G		G	G	G						T	T	T	T	T					T	T	T	S	S													S	S	S			S	S	S	S								T	T	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	.	.	N	A	V	G	V	E	L	T	P	L	E	K	L	P	I	G	K
Query Conservation																	.	.
Alig confidence					.												.	.
Template Conservation					.
Template Sequence		I	E	C	.	D	D	P	V	I	F	L	E	P	K	R	L	Y	N	G	P	F	D	G	H	H	D	R	P	V	T	P	W	S	K
Template Known Secondary structure				S	.	S	S								G	G	G	S	S	S				S		S	S	S					S	T	T
Template Predicted Secondary structure					.
Template SS confidence
		164	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions