Return to main results Retrieve Phyre Job Id

Job DescriptionP77488
Confidence96.75%DateThu Jan 5 12:29:48 GMT 2012
Rank104Aligned Residues143
% Identity11%Templated1ozha2
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase Pyr module
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   326...330..... ....340.........350.........360.........370.........380.........390. ........400..
Predicted Secondary structure  .





















..
Query SS confidence 









.























































. .










Query Sequence  GDWLCETAAK. DNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAI. . YSTFLQRAYDQ
Query Conservation     
      .   

  



  
     
    
 
    

 
  
   
 


  
  
    ..
  

  
 

Alig confidence 









.




















.








.























..










Template Conservation 

 
   
   

  


 

     
  

 .   
  
  .  
  
   
 



 

   
     


  
    
Template Sequence  ADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLL. DSSIRIIPV. RHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLITG
Template Known Secondary structure  T



TTTGG.GSSS
.SSSS

STTT
Template Predicted Secondary structure 








.


.







Template SS confidence 















































































   14.....20.........30.........40..... ....50.... .....60.........70.........80.........90.
 
   403......410.........420.........430.........440.........450.........460....... ..470........
Predicted Secondary structure 























....




Query SS confidence 
































































. . . .










Query Sequence  VLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLYTGYHY. . . . NDGPSAVRYPR
Query Conservation 
    
    

  
    
  
 

 


       
  

   
  
 
  
    
  

  ....   
  
   
Alig confidence 

.
















......

















.



















....










Template Conservation 
 . 
     


 
 
   ......   
  
         
 .             
  
   
     


 
 

 
Template Sequence  MA. TANSEGDPVVALGGAVK. . . . . . RADKSMDTVAMFSPVTKY. AIEVTAPDALAEVVSNAFRAAEQGRPGSAFVSLPQ
Template Known Secondary structure  .T



......TTT



GGG
S.

SGGGSSS

Template Predicted Secondary structure  .






......







.











Template SS confidence 















































































   92. ......100.........110 .........120........ .130.........140.........150.........160...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions