Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 27 Aligned Residues 181 % Identity 22% Template d1gpua2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.86

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		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.												.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																			.																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	D	P	S	S	G	C	L	P	K	S	S	G	G	L	P	.	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	M	.	.	.	.	.	.	.	.	.	.	.	V	E	F	S	R	K	F	P	D	R	Y	F	D	V	A	I	A	E
Query Conservation																			.																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	A	N	W	E	S	K	L	P	T	Y	T	A	K	D	S	A	V	A	T	R	K	L	S	E	T	V	L	E	D	V	Y	N	Q	L	P	E	L	I	G	G	S	A	D	L	T	P	S	N	L	T	R	W	K	E	A	L	D	F	Q	P	P	S	S	G	S	G	N	Y	S	G	R	Y	I	R	Y	G	I	R	E
Template Known Secondary structure			T	T	G	G	G	G	S					T	T	S			B														T	T	T		T	T						S	S						T		S		T	T							T	T	T	S	S			T	T								S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.			.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																								.
Query SS confidence																.	.																																								.
Query Sequence		Q	H	A	V	T	F	A	A	G	L	A	I	G	G	.	.	Y	K	P	I	V	A	I	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	L	P	V	L	F	A	I	D	R	A	G	I	.	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V
Query Conservation																.	.																																								.
Alig confidence																.	.																							.																	.
Template Conservation																																								.
Template Sequence		H	A	M	G	A	I	M	N	G	I	S	A	F	G	A	N	Y	K	P	Y	G	G	T	F	L	N	F	V	S	Y	A	A	G	A	V	R	L	S	.	A	L	S	G	H	P	V	I	W	V	A	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	T	L	A	H	F	R	S	L	P	N	I	Q
Template Known Secondary structure																T	T													G	G	G								.				T											S	G	G	G		T	T		T	T	T			S	S							T	S	S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.		.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G	Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	W	R	P	A	D	G	N	E	V	S	A	A	Y	K	N	S	L	E	S	K	H	T	P	S	I	I	A	L	S	R	Q	N	L	P	Q	L
Template Known Secondary structure							S															S	S									S	S		B
Template Predicted Secondary structure
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions