Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 24 Aligned Residues 236 % Identity 26% Template d1gpua1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 1.86

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		27	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure								.												.																										.	.	.	.	.	.	.	.															.	.	.											.
Query SS confidence								.												.																										.	.	.	.	.	.	.	.															.	.	.											.
Query Sequence		S	L	P	K	L	C	.	D	E	L	R	R	Y	L	L	D	S	V	.	S	R	S	S	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	.	.	.	.	.	.	.	.	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	.	.	.	Y	P	H	K	I	L	T	G	R	R	.
Query Conservation								.												.																										.	.	.	.	.	.	.	.															.	.	.											.
Alig confidence								.												.																										.	.	.	.	.	.	.	.															.	.	.											.
Template Conservation
Template Sequence		D	I	D	K	L	A	V	S	T	I	R	I	L	A	V	D	T	V	S	K	A	N	S	G	H	P	G	A	P	L	G	M	A	P	A	A	H	V	L	W	S	Q	M	R	M	N	P	T	N	P	D	W	I	N	R	D	R	F	V	L	S	N	G	H	A	V	A	L	L	Y	S	M	L	H	L	T	G	Y	D	L
Template Known Secondary structure																							T		S																		T					T	T		T	T		T	T							S	S	G	G	G											T	T		S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
				93	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.												.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.												.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	D	K	I	G	T	I	R	Q	K	G	G	.	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	.	.	.	.	.	.	.	.	.	.	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M
Query Conservation		.	.												.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.												.									.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		S	I	E	D	L	K	Q	F	R	Q	L	G	S	R	T	P	G	H	P	E	F	E	.	L	P	G	V	E	V	T	T	G	P	L	G	Q	G	I	S	N	A	V	G	M	A	M	A	Q	A	N	L	A	A	T	Y	N	K	P	G	F	T	L	S	D	N	Y	T	Y	V	F	L	G	D	G	C	L	Q	E	G	I
Template Known Secondary structure							T	T	T	T		T	T		S			S	S			T	T	.	S	T	T			S				S	T	T																						B	T	T	B																		S
Template Predicted Secondary structure																								.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																			.																.
Query SS confidence																			.																.
Query Sequence		A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	.	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	.	L	N	N	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V
Query Conservation																			.																.
Alig confidence																			.																.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	E	A	S	S	L	A	G	H	L	K	L	G	N	L	I	A	I	Y	D	D	N	K	I	T	I	D	G	A	T	S	I	S	F	D	E	D	V	A	K	R	Y	E	A	Y	G	W	E	V	L	Y	V	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T		T	T									S			T	T			G	G	G	T													T							S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	.	K	G	P	Q	F	L	H	I	M	T	K	K	G	R	G	Y	E	P	A	E	K	D	P	I	T	F	H	A	V	P	K	F	D	P	S
Query Conservation																																					.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	D	L	A	G	I	A	K	A	I	A	Q	A	K	L	S	K	D	K	P	T	L	I	K	M	T	T	T	I	G	Y	G	S	L	H	.	.	A	G	S	H	S	V	H	G	A	P	L	K	A	D	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T	T	S										T	T	T	T	S	T	T	.	.	T	T	S	G	G	G	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.
Template SS confidence
																				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions