Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 10 Aligned Residues 582 % Identity 20% Template c3uk1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site Resolution 2.15 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90
Predicted Secondary structure																								.																							.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																								.																							.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		P	K	E	S	L	P	K	L	C	D	E	L	R	R	Y	L	L	D	S	V	S	R	.	S	S	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	.	.	.	.	.	.	.	.	.	N	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	.	.	.	Y	P	H	K	I	L	T	G
Query Conservation																								.																							.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																								.																							.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		S	P	A	S	T	T	L	M	A	N	A	I	R	A	L	A	M	D	A	V	Q	Q	A	N	S	G	H	P	G	M	P	M	G	M	A	E	I	G	V	A	L	W	S	R	H	L	K	H	N	P	T	N	P	H	W	A	D	R	D	R	F	V	L	S	N	G	H	G	S	M	L	L	Y	S	L	L	H	L	T	G
Template Known Secondary structure																									T		S								T											T					T	T		T	T		T	T								S	G	G	G												T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		91	.				.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure				.	.	.												.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.												.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	.	.	.	D	K	I	G	T	I	R	Q	K	G	G	.	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	.	.	.	.	.	.	.	.	.	.	N	R	R	T	V	C	V	I	G	D	G	A	I	T
Query Conservation				.	.	.												.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.												.																																								.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																																															.
Template Sequence		Y	D	L	P	I	E	E	L	K	N	F	R	Q	L	H	S	K	T	P	G	H	P	E	Y	G	I	T	P	G	V	E	T	T	T	G	P	L	G	Q	G	L	A	N	A	V	G	M	A	L	G	E	A	L	L	A	A	E	F	N	R	D	D	A	K	I	V	D	H	H	T	Y	V	F	L	G	D	G	.	L	M
Template Known Secondary structure			S								T	T	T	S	T	T		S			S	S			T	T	T	S	T	T			S				S	T	T																						B	T	T	B															.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																						.																.																			.
Query SS confidence																						.																.																			.
Query Sequence		A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	.	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	.	L	N	N	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	.	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I
Query Conservation																						.																.																			.
Alig confidence																						.																.																			.																	.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		E	G	I	S	H	E	A	C	S	L	A	G	T	L	K	L	N	K	L	I	A	L	Y	D	D	N	G	I	S	I	D	G	D	V	V	N	W	F	H	D	D	T	P	K	R	F	E	A	Y	G	W	N	V	I	P	N	V	N	G	H	D	V	D	A	I	D	A	A	I	A	K	A	.	.	.	.	K	R	S	D
Template Known Secondary structure		S													T	T		T	T									S			T	T			G	G	G	T												T	T									T	T													.	.	.	.	T	T		S
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.
		234	.	.	.	.	.	240	.	.									.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		K	G	M	V	V	P	G	T	L	.	.	.	.	.	.	.	.	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	K	G	P	Q	F	L	H	I	M	T	K	K	G	R	G	Y	E	P	A	E	K	D	P	I	T	F	H	A	V	P	K	F	D
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	S	L	I	C	C	K	T	G	A	D	E	I	A	K	T	R	E	A	L	G	W	T	W	A	P	F	V	I	P	Q	E	V	Y	A	A	W	D	A	K	E	A	G	K	R	S	E	D	D	W	N	A	A	F	A	Q	Y	R	A	K	Y	P	A	E	A	A	E	F	E	R	R	M	A	G	T	L	P	A	D
Template Known Secondary structure		S																					T					T	T																																															T				T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		306	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.												.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	S	S	G	C	L	P	.	.	.	.	.	K	S	S	G	G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	M	.	.	.	.	.	.	.	.	.	.	.	V	E	F	S	R	K	F	P	D	R	Y	F	D	V	A	I	A
Query Conservation									.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	A	K	A	A	A	I	V	A	G	A	N	E	R	G	E	T	V	A	T	R	K	A	S	Q	Q	T	I	E	G	L	A	A	V	L	P	E	L	L	G	G	S	A	D	L	T	G	S	N	L	T	N	W	K	A	S	K	A	V	R	A	N	A	D	G	P	G	V	Q	W	G	N	H	I	N	Y	G	V	R
Template Known Secondary structure																																						T	T						S	S						T				T	T			B					S	S	S	S	S					S						S
Template Predicted Secondary structure
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																								.
Query SS confidence																	.																																								.
Query Sequence		E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	.	Y	K	P	I	V	A	I	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	L	P	V	L	F	A	I	D	R	A	G	I	.	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V
Query Conservation																	.																																								.
Alig confidence																	.																			.																					.
Template Conservation																																				.
Template Sequence		E	F	G	M	S	A	A	I	N	G	L	V	L	H	G	G	Y	K	P	F	G	G	T	F	L	T	F	S	D	Y	S	R	N	A	.	L	R	V	A	A	L	M	K	V	P	S	I	F	V	F	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	S	V	E	H	V	A	S	L	R	L	I	P	N	L	D
Template Known Secondary structure																S	S									G	G	G								.								T											S	G	G	G		T	T		T	T	T			S	S							T	S	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.								.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G	Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V	E	L	T	P	L	E	K	L	P	.	.	.	.	.	.	.	I	G	K	G	I	V	K	R	R	G	E	K	L	A	I	L	N	F	G	T	L	M	P	E	A	A	K
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence																						.																										.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		V	W	R	P	A	D	T	V	E	T	A	V	A	W	T	Y	A	V	A	H	.	Q	H	P	S	C	L	I	F	S	R	Q	N	L	A	F	N	A	R	T	D	A	Q	L	A	N	V	E	K	G	G	Y	V	L	R	D	W	D	E	E	I	V	A	R	K	I	I	L	I	A	T	G	S	E	V	E	L	A	M	K
Template Known Secondary structure						S	S														S	.	S	S								S	S															G	G	G	S	S								S	S			S									T	T
Template Predicted Secondary structure																						.
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.		.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		521	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		V	A	E	S	L	.	.	.	.	.	N	A	T	L	V	D	M	R	F	V	K	P	L	D	E	A	L	I	L	E	M	A	A	S	H	E	A	L	V	T	V	E	E	N	A	I	M	G	G	A	G	S	G	V	N	E	V	L	M	A	H	R	K	P	V	P	V	L	N	I	G	L	P	D	F	F	I	P	Q	G
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																				.	.																																	.	.	.	.	.					.
Template Conservation																															.	.																																	.	.	.	.	.					.
Template Sequence		A	V	E	P	L	A	Q	Q	G	I	A	A	R	V	V	S	M	P	S	S	D	V	F	D	R	Q	D	A	E	.	.	Y	R	E	R	V	L	P	H	G	V	R	R	V	A	I	E	A	G	V	T	D	F	W	R	K	Y	V	G	L	E	G	G	.	.	.	.	.	V	V	G	I	.	D	T	F	G	E	S	A
Template Known Secondary structure									T	T									S							T	S				.	.						S		T	T	S							S	S		S	G	G	G					T	T	T	S		.	.	.	.	.					.		S				S	S
Template Predicted Secondary structure																															.	.																																	.	.	.	.	.					.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.			.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.						.	.	.	.		.	660	.	.	.	.	.
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	E	M	R	A	E	L	G	L	D	A	A	G	M	E	A	K	I	K	A	W	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	G	V	L	F	K	H	F	G	F	T	V	E	H	V	I	E	T	A	K	A	V	L	A
Template Known Secondary structure										T	T		S
Template Predicted Secondary structure
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690