Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 7 Aligned Residues 581 % Identity 19% Template c3hylB_ PDB info PDB header:transferase Chain: B: PDB Molecule:transketolase; PDBTitle: crystal structure of transketolase from bacillus anthracis Resolution 2.16 Å

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		28	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.
Predicted Secondary structure							.														.																							.	.	.	.	.	.	.	.	.																.	.	.										.	.
Query SS confidence							.														.																							.	.	.	.	.	.	.	.	.																.	.	.										.	.
Query Sequence		L	P	K	L	C	.	D	E	L	R	R	Y	L	L	D	S	V	S	R	.	S	S	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	.	.	.	.	.	.	.	.	.	N	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	.	.	.	Y	P	H	K	I	L	T	G	R	.	.
Query Conservation							.														.																							.	.	.	.	.	.	.	.	.																.	.	.										.	.
Alig confidence							.														.																							.	.	.	.	.	.	.	.	.																.	.	.										.	.
Template Conservation
Template Sequence		I	E	Q	L	S	I	N	T	I	R	T	L	S	I	D	A	I	E	K	A	N	S	G	H	P	G	X	P	X	G	A	A	P	X	A	Y	T	L	W	T	Q	F	X	K	H	N	P	N	N	P	T	W	F	N	R	D	R	F	V	L	S	A	G	H	G	S	X	L	L	Y	S	L	L	H	L	S	G	Y	D	V
Template Known Secondary structure																						T		S																			T					T	T		T	T		T	T	S						S	S	G	G	G											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			92	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.											.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.													.																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence		.													.																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		.	R	D	K	I	G	T	I	R	Q	K	G	G	.	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	.	.	.	.	.	.	.	.	.	.	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M
Query Conservation		.													.																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.													.																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	X	D	D	L	K	N	F	R	Q	W	G	S	K	T	P	G	H	P	E	Y	G	H	T	A	G	V	D	A	T	T	G	P	L	G	Q	G	I	A	T	A	V	G	X	A	X	A	E	R	H	L	A	A	K	Y	N	R	D	A	Y	N	I	V	D	H	Y	T	Y	A	I	C	G	D	G	D	L	X	E	G	V
Template Known Secondary structure							T	T	T	T		T	T		S			S	S			T	T	T	S	T	T			S				S	T	T																							S	S				S															S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure															.																					.																			.
Query SS confidence															.																					.																			.
Query Sequence		A	F	E	A	M	N	H	A	G	D	I	R	P	.	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	.	N	N	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	.	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M
Query Conservation															.																					.																			.
Alig confidence															.																					.																			.																.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		S	A	E	A	S	S	L	A	A	H	L	Q	L	G	R	L	V	V	L	Y	D	S	N	D	I	S	L	D	G	D	L	N	R	S	F	S	E	S	V	E	D	R	Y	K	A	Y	G	W	Q	V	I	R	V	E	D	G	N	D	I	E	A	I	A	K	A	I	E	E	A	.	.	.	K	A	D	E	K	R	P	T
Template Known Secondary structure												T	T		T	T									S	B		S	S	S	B	G	G	G	T													T							S		T	T													.	.	.				T	T	S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.
		237	.	.	240	.	.	.	.	.	.	.	.	.																											250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	P	G	T	L	F	E	E	L	G	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	K	G	P	Q	F	L	H	I	M	T	K	K	G	R	G	Y	E	P
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	E	V	R	T	T	I	G	F	G	S	P	N	K	S	G	K	S	A	S	H	G	S	P	L	G	V	E	E	T	K	L	T	K	E	A	Y	A	W	T	A	E	Q	D	F	H	V	A	E	E	V	Y	E	N	F	R	K	T	V	Q	D	V	G	E	T	A	Q	A	E	W	N	T	X	L	G	E	Y	A	Q
Template Known Secondary structure									T	T	T	T		T	T	T	T	T	S	G	G	G	T	S	S														T	T					S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
							291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																															.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																															.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	E	K	D	P	I	T	F	H	A	V	P	K	F	D	P	S	S	G	C	L	P	K	S	S	G	G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	M	.	.	.	.	.	.	V	E	F	S	R	K	F
Query Conservation		.	.	.	.	.																																																															.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																															.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	P	E	L	A	N	E	L	Q	A	A	X	N	G	L	L	P	E	G	W	E	Q	N	L	P	T	Y	E	L	G	S	K	A	A	T	R	N	S	S	G	A	V	I	N	A	I	A	E	S	V	P	S	F	F	G	G	S	A	D	L	A	G	S	N	K	T	Y	X	N	N	E	K	D	F	T	R	D	D	Y
Template Known Secondary structure			S												T	T				T	T	G	G	G	G						T	T																					T	T						S	S						T				T	T	S		B		B	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																								.
Query SS confidence																											.																																								.
Query Sequence		P	D	R	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	.	Y	K	P	I	V	A	I	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	L	P	V	L	F	A	I	D	R	A	G	I	.	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L
Query Conservation																											.																																								.
Alig confidence																											.																			.																					.
Template Conservation																																														.
Template Sequence		S	G	K	N	I	W	Y	G	V	R	E	F	A	X	G	A	A	X	N	G	I	A	L	H	G	G	L	K	T	Y	G	G	T	F	F	V	F	S	D	Y	L	R	P	A	.	I	R	L	A	A	L	X	Q	L	P	V	T	Y	V	F	T	H	D	S	I	A	V	G	E	D	G	P	T	H	E	P	I	E	Q	L
Template Known Secondary structure		T								S																S	S									G	G	G								.								T											S	G	G	G	G	G	G		G	G	G	S		S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490				.	.	.	.	.	.	.	.	.	500				.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure																																																							.	.	.											.	.	.
Query SS confidence																																																							.	.	.											.	.	.
Query Sequence		S	Y	L	R	C	I	P	E	M	V	I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G	Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V	E	L	T	P	L	E	.	.	.	K	L	P	I	G	K	G	I	V	K	.	.	.	R	R	G	E	K	L	A	I	L	N	F
Query Conservation																																																							.	.	.											.	.	.
Alig confidence																																																							.	.	.											.	.	.
Template Conservation
Template Sequence		A	A	L	R	A	X	P	N	V	S	V	I	R	P	A	D	G	N	E	S	V	A	A	W	R	L	A	L	E	S	T	N	K	P	T	A	L	V	L	T	R	Q	D	L	P	T	L	E	G	A	K	D	D	T	Y	E	K	V	A	K	G	A	Y	V	V	S	A	S	K	K	E	T	A	D	V	I	L	L	A	T
Template Known Secondary structure						T	S	T	T							S	S															S	S	S								S	S						G	G	G	S	T	T							T	S								S	S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		512	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		G	T	L	M	P	E	A	A	K	V	A	E	S	L	.	.	.	.	.	N	A	T	L	V	D	M	R	F	V	K	P	L	D	E	A	L	I	L	E	M	A	A	S	H	E	A	L	V	T	V	E	E	N	A	I	M	G	G	A	G	S	G	V	N	E	V	L	M	A	H	R	K	P	V	P	V	L	N	I	G
Query Conservation																.	.	.	.	.
Alig confidence																.	.	.	.	.																															.																							.	.	.	.	.
Template Conservation																																																			.																							.	.	.	.	.
Template Sequence		G	S	E	V	S	L	A	V	E	A	Q	K	A	L	A	V	D	G	V	D	A	S	V	V	S	X	P	S	X	D	R	F	E	A	Q	T	A	E	Y	K	E	S	V	L	P	K	A	V	T	.	K	R	F	A	I	E	X	G	A	T	F	G	W	H	R	Y	V	G	L	E	G	D	.	.	.	.	.	V	L	G
Template Known Secondary structure		G	G	G														T	T									S								S									S		T	T			.							S	S			T	T	T					T	T	T			.	.	.	.	.
Template Predicted Secondary structure																																																			.																							.	.	.	.	.
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.						.	.	.
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	D	F	F	I	P	Q	G	T	Q	E	E	M	R	A	E	L	G	L	D	A	A	G	M	E	A	K	I	K	A	W	L
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		I	.	D	T	F	G	A	S	A	P	G	E	K	I	X	E	E	Y	G	F	T	V	E	N	V	V	R	K	V	K	E	X	L
Template Known Secondary structure			.		S				S	S									T	T		S
Template Predicted Secondary structure			.
Template SS confidence
		635		.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.