Job Description P77488 Confidence 98.77% Date Thu Jan 5 12:29:48 GMT 2012 Rank 89 Aligned Residues 199 % Identity 14% Template c2x7jA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	C	D	E	L	R	R	Y	L	L	D	S	V	S	R	S	S	G	H	F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	R	D	K	I	G	T	I	R	Q	K	G	G	L	H	P	F	P	W
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	W	L	E	K	W	Q	F	V	N	G	R	F	R	E	H	L	Q	T	I	S	S	E	D	V	S	F	E	G	N	L	Y	R	I	L	Q	H	L	V	P	E	N	S	S	L	F	V	G	N	S	M	P	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	D	V	D	T	F	F	E	K	Q	D	R	P	F
Template Known Secondary structure																				T	S					T	T	S												S		T	T							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.											B	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.														.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V
Query Conservation
Alig confidence							.	.	.																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.
Template Conservation							.	.	.																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.
Template Sequence		R	I	Y	S	N	.	.	.	R	G	A	N	G	I	D	G	V	V	S	S	A	M	G	V	C	E	G	.	.	.	.	.	T	K	A	P	V	T	L	V	I	G	D	L	S	F	Y	.	.	H	D	L	N	G	L	L	A	A	K	K	L	G	I	P	L	T	V	I	L	V	N	N	D	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	T	T	T			S	S	S												.	.	.	.	.		T	S													.	.		T	G	G	G	G																		S	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.
Template SS confidence
		423	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.						.	.	.	450	.	.	.	.	.	.	.	.	.	460	.			.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	L	N	N	H	L	A	Q	L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	I	F	S	F	L	P	Q	A	S	E	K	T	H	F	E	D	L	F	G	T	P	T	G	L	D	F	K	H	A	A	A	L	Y	G	G	T	Y	.	.	.	S	C	P	A	S	W	D	E	F	K	T	A	Y	A	P	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	G	G	S	G	G	G	S									T	T							T							T	T				.	.	.				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template SS confidence
																							486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.				.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
		270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	K	G	P	Q	F	L	H	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	K	P	G	L	H	L	I	E	I	K	T
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		542	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions