Job Description P77488 Confidence 98.69% Date Thu Jan 5 12:29:48 GMT 2012 Rank 91 Aligned Residues 127 % Identity 17% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	H	L	A	Q
Query Conservation
Alig confidence																				.	.	.	.																	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.																	.	.																									.	.	.	.	.	.	.	.	.	.
Template Sequence		L	W	G	S	I	G	Y	T	F	P	A	A	L	G	S	Q	I	A	.	.	.	.	D	K	E	S	R	H	L	L	F	I	G	D	G	S	L	Q	.	.	L	T	V	Q	E	L	G	L	S	I	R	E	K	L	N	P	I	C	F	I	I	N	N	D	.	.	.	.	.	.	.	.	.	.	G	Y	T	V	E	R
Template Known Secondary structure		T	T			T	T	T												.	.	.	.		T	T	S													.	.			G	G	G							T	T										S	S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																				.	.	.	.																	.	.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.											.	.	460	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.
Predicted Secondary structure																																																											.	.																	.
Query SS confidence																																																											.	.																	.
Query Sequence		L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	.	.	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	.	L	K	G	P
Query Conservation																																																											.	.																	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	H	G	P	T	Q	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	I	P	M	W	N	Y	S	K	L	P	E	T	F	G	A	T	E	D	R	V	V	S	K	I	V	R	T	E	N	E	F	V	S	V	M	K	E	A	Q	A	D	V	N	R	M
Template Known Secondary structure				S		T	T		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G							G	G	G					T	T			T	T	T								B															T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.																									.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	H	I	M	T	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	I	E	L	V	L	E	K	E
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		520	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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