Job Description P77488 Confidence 98.70% Date Thu Jan 5 12:29:48 GMT 2012 Rank 90 Aligned Residues 124 % Identity 18% Template c2jlaD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein Resolution 2.81 Å

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	G	H	S	S	T	S	I	S	A	G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	M	S	I	S	E	N	V	G	A	L	N	N	H	L	A	Q
Query Conservation
Alig confidence																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	S	G	I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	.	.	.	.	S	G	K	P	T	L	A	I	V	G	D	L	S	A	L	.	.	Y	D	L	N	A	L	A	L	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S			S	S	S												.	.	.	.	.																.	.		T	G	G	G	G	G	G	G	G			S	S										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.																.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.						.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	G	K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	L	K	G	P	Q	F	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																			.																					.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	Q	I	F	S	L	L	P	T	P	Q	S	E	R	E	R	F	.	Y	L	X	P	Q	N	V	H	F	E	H	A	A	A	X	F	E	L	K	Y	.	.	.	H	R	P	Q	N	W	Q	E	L	E	T	A	F	A	D	A	W	R	T	P	T	T	T	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S		T					T	T			G	G	G					.	T	T							S							T	T				.	.	.				S	S												T	T	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																			.																					.	.	.
Template SS confidence
															471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.				.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		279	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	X	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions