Job Description P77488 Confidence 99.29% Date Thu Jan 5 12:29:48 GMT 2012 Rank 59 Aligned Residues 238 % Identity 16% Template c2c3yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus Resolution 1.93 Å

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		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	Y	K	P	I	V	A	I	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	L	P	V	L	F	A	I	D	R	A	G	I	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V	I
Query Conservation
Alig confidence																																							.																																				.
Template Conservation																																							.																																				.
Template Sequence		S	E	A	G	A	A	G	A	V	H	G	A	L	A	A	G	A	L	T	T	T	F	T	A	S	Q	G	L	L	L	M	I	P	N	M	Y	K	.	I	S	G	E	L	L	P	G	V	F	H	V	T	A	R	A	I	A	A	H	A	L	S	I	F	G	D	H	Q	D	I	Y	A	A	R	.	Q	T	G	F	A	M
Template Known Secondary structure		S														T	T																						.				T	T										B				S	S	S				S	B		S						T	T	.	T	S	S
Template Predicted Secondary structure																																							.																																				.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.																												.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G	Y	H	Y	N	.	.	.	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	P	L	E	K	L	P	I	G	K	G	I
Query Conservation																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	S	S	S	V	Q	E	A	H	D	M	A	L	V	A	H	L	A	A	I	E	S	N	V	P	F	M	H	F	F	D	G	F	R	T	S	H	E	I	Q	K	I	E	V	L	D	Y	A	D	M	A	S	L	V	N	Q	K	A	L	A	E	F	R	A	K	S	M	N	P	E	H	P	H	V	R	G	T	A	Q
Template Known Secondary structure						S																												T	T	T	T	T	S																	S												S			T	T	S					S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
																																													499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	R	R	G	E	K	L	A	I	L	N	F	G	T	L	M	P	E	A	A	K	V	A	E	S	L	.	.	.	.	.	N	A	T	L	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		N	P	D	I	Y	F	Q	G	R	E	A	A	N	P	Y	Y	L	K	V	P	G	I	V	A	E	Y	M	Q	K	V	A	S	L	T	G	R	S	Y	K	L	F	D	Y	V	G	A	P	D	A	E	R	V	I	V	S	M	G	S	S	C	E	T	I	E	E	V	I	N	H	L	A	A	K	G	E	K	I	G	L	I
Template Known Secondary structure			T	T	T							T	T																							S					S							T	T		S							T	T														T	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.		.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.					.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																			.																		.	.	.	.
Query SS confidence																			.																		.	.	.	.
Query Sequence		D	M	R	F	V	K	P	L	D	E	A	L	I	L	E	M	A	.	A	S	H	E	A	L	V	T	V	E	E	N	A	I	M	G	G	.	.	.	.	A	G	S	G	V	N	E	V	L	M	A	H	R	K	P	V	P	V	L	N	I	G	L	P	D	F	F	I	P	Q	G	T	Q	E	E	M	R	A	E	L	G
Query Conservation																			.																		.	.	.	.
Alig confidence																			.																		.	.	.	.																				.				.	.								.	.	.	.	.	.	.	.
Template Conservation																																																												.				.	.								.	.	.	.	.	.	.	.
Template Sequence		K	V	R	L	Y	R	P	F	V	S	E	A	F	F	A	A	L	P	A	S	A	K	V	I	T	V	L	D	R	T	K	E	P	G	A	P	G	D	P	L	Y	L	D	V	C	S	A	F	V	E	R	G	E	A	M	P	K	I	.	L	A	G	.	.	R	Y	G	L	G	S	K	.	.	.	.	.	.	.	.	E
Template Known Secondary structure				S				S									S	S		T	T									S	S			T	T		S	S															T	S						.				.	.				G	G	G		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.				.	.								.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.			.	.	.	.	.	.	.									.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	A	G	M	E	A	K	I	K	A	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	S	P	A	M	V	K	S	V	Y	D	N	M	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions