Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 19 Aligned Residues 298 % Identity 19% Template c2bp7F_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: new crystal form of the pseudomonas putida branched-chain2 dehydrogenase (e1) Resolution 2.9 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																					.	.	.	.									.
Query SS confidence																																					.	.	.	.									.
Query Sequence		G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	.	.	.	.	M	V	E	F	S	R	K	F	.	P	D	R	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	Y	K	P	I	V	A	I
Query Conservation																																					.	.	.	.									.
Alig confidence																																					.	.	.	.									.
Template Conservation
Template Sequence		T	T	M	T	M	I	Q	A	L	R	S	A	M	D	V	M	L	E	R	D	D	N	V	V	V	Y	G	Q	D	V	G	Y	F	G	G	V	F	R	C	T	E	G	L	Q	T	K	Y	G	K	S	R	V	F	D	A	P	I	S	E	S	G	I	V	G	T	A	V	G	M	G	A	Y	G	L	R	P	V	V	E	I
Template Known Secondary structure																						T	T						T	T		S	S	S			T	T	S	T	T	T	T							T	T	T						S																T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
			392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.							.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure		.																					.	.	.	.	.	.
Query SS confidence		.																					.	.	.	.	.	.
Query Sequence		.	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	.	.	.	.	.	.	L	P	V	L	F	A	I	D	R	A	G	I	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V	I	M	T	P	S	D	E	N	E	C	R	Q	M	L	Y	T	G
Query Conservation		.																					.	.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	A	D	Y	F	Y	P	A	S	D	Q	I	V	S	E	M	A	R	L	R	Y	R	S	A	G	E	F	I	A	P	L	T	L	R	M	P	C	G	G	G	I	Y	G	G	Q	T	H	S	Q	S	P	E	A	M	F	T	Q	V	C	G	L	R	T	V	M	P	S	N	P	Y	D	A	K	G	L	L	I	A	S
Template Known Secondary structure		S		G	G	G		G	G	G						T	T	T	T	T					T	T	T	S	S													S	S	S			T	T	S	S				T					T	S	T	T								S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.																				.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	E	K	L	P	I	G	K	G	I	V	K	R	R	G	E	K	L	A	I	L	N	F	G	T	L	M	P	E	A	A	K	V	A	E	S	L
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		I	E	C	.	D	D	P	V	I	F	L	E	P	K	R	L	Y	N	G	P	F	D	G	H	H	D	R	P	V	T	P	W	S	K	H	P	H	S	A	V	P	D	G	Y	Y	T	V	P	L	D	K	A	A	I	T	R	P	G	N	D	V	S	V	L	T	Y	G	T	T	V	Y	V	A	Q	V	A	A	E	E	S
Template Known Secondary structure					.	S	S								G	G	G	S	S	S				S		S	S	S					G	G	G	S	T	T					S	S						T	T									S	S							T	T
Template Predicted Secondary structure					.
Template SS confidence
		164	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
				526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.				.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600
Predicted Secondary structure		.	.																																																					.	.	.
Query SS confidence		.	.																																																					.	.	.
Query Sequence		.	.	N	A	T	L	V	D	M	R	F	V	K	P	L	D	E	A	L	I	L	E	M	A	A	S	H	E	A	L	V	T	V	E	E	N	A	I	M	G	G	A	G	S	G	V	N	E	V	L	M	A	H	R	.	.	.	K	P	V	P	V	L	N	I	G	L	P	D	F	F	I	P	Q	G	T	Q	E	E	M
Query Conservation		.	.																																																					.	.	.
Alig confidence		.	.																																																					.	.	.																			.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		G	V	D	A	E	V	I	D	L	R	S	L	W	P	L	D	L	D	T	I	V	E	S	V	K	K	T	G	R	C	V	V	V	H	E	A	T	R	T	C	G	F	G	A	E	L	V	S	L	V	Q	E	H	C	F	H	H	L	E	A	P	I	E	R	V	T	G	W	D	T	P	Y	P	H	A	.	.	.	.	Q
Template Known Secondary structure											S				S														S										S	T	T	S													S	T	T	T			S									S	S				S	T	.	.	.	.	T
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.					.
		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	L	G	L	D	A	A	G	M	E	A	K	I	K	A	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	A	Y	F	P	G	P	S	R	V	G	A	A	L	K	K	V	M
Template Known Secondary structure						S														T
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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