Job Description P77488 Confidence 98.88% Date Thu Jan 5 12:29:48 GMT 2012 Rank 83 Aligned Residues 174 % Identity 21% Template c1zpdA_ PDB info PDB header:alcohol fermentation Chain: A: PDB Molecule:pyruvate decarboxylase; PDBTitle: pyruvate decarboxylase from zymomonas mobilis Resolution 1.86 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	G	L	G	T	V	E	L	T	V	A	L	H	Y	V	Y	N	T	P	F	D	Q	L	I	W	D	V	G	H	Q	A	Y	P	H	K	I	L	T	G	R	R	D	K	I	G	T	I	R	Q	K	G	G	L	H	P	F	P	W	R	G	E	S	E	Y	D	V	L	S	V	G	H	S	S	T	S	I	S	A
Query Conservation
Alig confidence																				.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	A	P	L	V	N	A	E	I	A	R	Q	V	E	A	L	L	.	T	P	N	T	T	V	I	A	E	T	G	D	S	W	F	N	A	Q	R	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	G	A	R	V	E	Y	E	M	Q	W	G	H	I	G	W	S	V	P	A
Template Known Secondary structure		T	T	S	B													T		.		T	T							S	S								T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							T	T	T			T	T	T
Template Predicted Secondary structure																				.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.																			400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.
Query Sequence		G	I	G	I	A	V	A	A	E	K	E	G	K	N	R	R	T	V	C	V	I	G	D	G	A	I	T	A	G	M	A	F	E	A	M	N	H	A	G	D	I	R	P	D	M	L	V	I	L	N	D	N	E	.	.	.	.	.	.	.	M	S	I	S	E	N	V	G	A	L	N	N	H	L	A	Q	L	L	S	G
Query Conservation																																																							.	.	.	.	.	.	.
Alig confidence									.	.	.	.																				.	.																						.	.	.	.	.	.	.
Template Conservation									.	.	.	.																				.	.
Template Sequence		A	F	G	Y	A	V	G	.	.	.	.	A	P	E	R	R	N	I	L	M	V	G	D	G	S	F	Q	L	T	A	.	.	Q	E	V	A	Q	M	V	R	L	K	L	P	V	I	I	F	L	I	N	N	Y	G	Y	T	I	E	V	M	I	H	D	G	P	Y	N	N	I	K	N	W	D	Y	A	G	L	M	E	V
Template Known Secondary structure									.	.	.	.		T	T	S															G	.	.	G	G							T	T											S	S						T	T	S			G	G	G
Template Predicted Secondary structure									.	.	.	.																				.	.
Template SS confidence
		422	.	.	.	.	.	.					.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		K	L	Y	S	S	L	R	E	G	G	K	K	V	F	S	G	V	P	P	I	K	E	L	L	K	R	T	E	E	H	I	K	G	M	V	V	P	G	T	L	F	E	E	L	G	F	N	Y	I	G	P	V	D	G	H	D	V	L	G	L	I	T	T	L	K	N	M	R	D	.	L	K	G	P	Q	F	L	H	I	M
Query Conservation																																																																							.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.																.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		F	N	G	N	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	S	G	A	A	K	G	L	K	A	.	.	.	K	T	G	G	E	L	A	E	A	I	K	V	A	L	A	N	T	D	G	P	T	L	I	E	C	F
Template Known Secondary structure					T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										.	.	.	S	B																S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		496	.	.	.	500	.																																			.	.	.	.	.	.	.	.	510	.	.				.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
		282	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	R	E
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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