Job Description P77488 Confidence 100.00% Date Thu Jan 5 12:29:48 GMT 2012 Rank 16 Aligned Residues 308 % Identity 18% Template c1olsB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase Resolution 1.85 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.				.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																														.	.	.									.
Query SS confidence																																														.	.	.									.
Query Sequence		S	G	C	L	P	K	S	S	G	G	L	P	S	Y	S	K	I	F	G	D	W	L	C	E	T	A	A	K	D	N	K	L	M	A	I	T	P	A	M	R	E	G	S	G	.	.	.	M	V	E	F	S	R	K	F	.	P	D	R	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G
Query Conservation																																														.	.	.									.
Alig confidence																																														.	.	.									.
Template Conservation
Template Sequence		T	F	Q	P	E	Y	G	Q	T	Q	K	M	N	L	F	Q	S	V	T	S	A	L	D	N	S	L	A	K	D	P	T	A	V	I	F	G	E	D	V	A	F	G	G	V	F	R	C	T	V	G	L	R	D	K	Y	G	K	D	R	V	F	N	T	P	L	C	E	Q	G	I	V	G	F	G	I	G	I	A	V	T
Template Known Secondary structure								S																							T	T						T	T	T	T	T	T		T	T	S	T	T	T	T							T	T	T						S															T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		384	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410							.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure										.																				.	.	.	.	.	.														.
Query SS confidence										.																				.	.	.	.	.	.														.
Query Sequence		G	Y	K	P	I	V	A	I	.	Y	S	T	F	L	Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	.	.	.	.	.	.	K	L	P	V	L	F	A	I	D	R	A	G	I	.	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	M	V	I	M	T	P	S	D	E	N
Query Conservation										.																				.	.	.	.	.	.														.
Alig confidence										.																				.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	A	T	A	I	A	E	I	Q	F	A	D	Y	I	F	P	A	F	D	Q	I	V	N	E	A	A	K	Y	R	Y	R	S	G	D	L	F	N	C	G	S	L	T	I	R	S	P	W	G	C	V	G	H	G	A	L	Y	H	S	Q	S	P	E	A	F	F	A	H	C	P	G	I	K	V	V	I	P	R	S	P	F
Template Known Secondary structure		T								S	S	G	G	G		G	G	G						T	T	G	G	G						T	T	S	S			T	T								S			S	S		G	G	G	S	S									T		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.				.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.							.
Predicted Secondary structure																																.	.	.																																									.	.	.	.	.	.
Query SS confidence																																.	.	.																																									.	.	.	.	.	.
Query Sequence		E	C	R	Q	M	L	Y	T	G	Y	H	Y	N	D	G	P	S	A	V	R	Y	P	R	G	N	A	V	G	V	E	.	.	.	L	T	P	L	E	K	L	P	I	G	K	G	I	V	K	R	R	G	E	K	L	A	I	L	N	F	G	T	L	M	P	E	A	A	K	V	A	E	S	L	.	.	.	.	.	.	N
Query Conservation																																.	.	.																																									.	.	.	.	.	.
Alig confidence														.																		.	.	.																																									.	.	.	.	.	.
Template Conservation														.
Template Sequence		Q	A	K	G	L	L	L	S	C	I	E	D	.	K	N	P	C	I	F	F	E	P	K	I	L	Y	R	A	A	A	E	E	V	P	I	E	P	Y	N	I	P	L	S	Q	A	E	V	I	Q	E	G	S	D	V	T	L	V	A	W	G	T	Q	V	H	V	I	R	E	V	A	S	M	A	K	E	K	L	G	V	S
Template Known Secondary structure													S	.	S	S								G	G	G	S	S	S							S	S						T	T									S	S							T	T
Template Predicted Secondary structure														.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.				.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		A	T	L	V	D	M	R	F	V	K	P	L	D	E	A	L	I	L	E	M	A	A	S	H	E	A	L	V	T	V	E	E	N	A	I	M	G	G	A	G	S	G	V	N	E	V	L	M	A	H	R	.	.	.	K	P	V	P	V	L	N	I	G	L	P	D	F	F	I	P	Q	G	T	Q	E	E	M	R	A	E
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.																			.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		C	E	V	I	D	L	R	T	I	I	P	W	D	V	D	T	I	C	K	S	V	I	K	T	G	R	L	L	I	S	H	E	A	P	L	T	G	G	F	A	S	E	I	S	S	T	V	Q	E	E	C	F	L	N	L	E	A	P	I	S	R	V	C	G	Y	D	T	P	F	P	H	I	.	.	.	.	F	E	P	F
Template Known Secondary structure												S																								S	T	T															T	T	T			S									S	S				S	T	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	D	A	A	G	M	E	A	K	I	K	A	W	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	P	D	K	W	K	C	Y	D	A	L	R	K	M	I	N
Template Known Secondary structure			S															T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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