Job Description P0A7S9 Confidence 100.00% Date Thu Jan 5 11:06:08 GMT 2012 Rank 4 Aligned Residues 118 % Identity 33% Template c3iz6M_ PDB info PDB header:ribosome Chain: M: PDB Molecule:40s ribosomal protein s18 (s13p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	R	I	A	G	I	N	I	P	D	H	K	H	A	V	I	A	L	T	S	I	Y	G	V	G	K	T	R	S	K	A	I	L	A	A	A	G	I	A	E	D	V	K	I	S	E	L	S	E	G	Q	I	D	T	L	R	D	E	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	R	V	L	N	T	N	V	D	G	K	Q	K	I	M	F	A	L	T	S	I	K	G	V	G	R	R	F	S	N	I	V	C	K	K	A	D	I	D	M	N	K	R	A	G	E	L	S	A	E	E	M	D	R	L	M	A	V	V	H	N	P	R	Q	F	K	V	P	D	W	F	L	N	R	K	K	D	Y	K
Template Known Secondary structure					T	T	T	T					S	S	B						T	T	S	T	T														T			S	S	S	B	T	T	T	S														S		S	S							S		S				S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
						62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	K	F	V	V	E	G	D	L	R	R	E	I	S	M	S	I	K	R	L	M	D	L	G	C	Y	R	G	L	R	H	R	R	G	L	P	V	R	G	Q	R	T	K	T	N	A	R	T	R	K	G	P	R	K	P	I	K	K
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		D	G	R	F	S	Q	V	V	S	N	A	V	D	M	K	L	R	D	D	L	E	R	L	K	K	I	R	N	H	R	G	L	R	H	Y	W	G	V	R	V	R	G	Q	H	T	K	T	T	G	R	R	G	K	T	V	G	V	S	K	K	R
Template Known Secondary structure				S			T	T		T																		T										T			S	S					S	S								S			S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions