 |
Job Description | P0A7S9 | Confidence | 92.17% | Date | Thu Jan 5 11:06:08 GMT 2012 |
Rank | 23 | Aligned Residues | 49 |
% Identity | 29% | Template | c3fuxB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:dimethyladenosine transferase; |
PDBTitle: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in2 complex with 5'-methylthioadenosine in space group p212121
|
Resolution | 1.68 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | K | H | A | V | I | A | L | T | S | I | Y | G | V | G | K | T | R | S | K | A | I | L | A | A | A | G | I | A | E | D | V | K | I | S | E | L | S | E | G | Q | I | D | T | L | R | D | E | V | A |
Query Conservation |   |
  |
|   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
R | K | T | L | L | N | A | L | A | A | A | . |
G | Y | P | K | A | R | V | E | E | A | L | R | A | L | G | L | P | P | R | V | R | A | E | E | L | D | L | E | A | F | R | R | L | R | E | G | L | E |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T |
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
220 | . | . | . | . | . | . | . | . | . | 230 | |
. | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|