|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | R | I | A | G | I | N | I | P | D | H | K | H | A | V | I | A | L | T | S | I | Y | G | V | G | K | T | R | S | K | A | I | L | A | A | A | G | I | A | E | D | V | K | I | S | E | L | S | E | G | Q | I | D | T | L | R | D | E | V | A | K | F | V | V | E | G | D | L | R | R | E | I | S | M | S | I | K | R | L | M |
Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
I | R | I | G | G | V | E | I | P | N | H | K | R | V | E | Y | S | L | Q | Y | I | H | G | I | G | R | S | R | S | R | Q | I | L | L | D | L | N | F | D | N | K | V | . |
T | K | D | L | S | E | E | E | V | I | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | K | E | K | R | F | N | R | V | A | I | E | R | L | K |
Template Known Secondary structure |   |
|
|
| S | S | S |
|
|
|
| S | S | B | T | T | T | G | G | G | G | S | T | T |
|
| S | S | T | T | T | G | G | G | T | T | T | T |
|
| S |
| B | . | T | T | S |
|
| S | S | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . |  | S | S |
|
|
|
| S | T | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  | . |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | G | C | Y | R | G | L | R | H | R | R | G | L | P | V | R | G | Q | R | T | K | T | N | A | R | T | R | K | G |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
Template Sequence |   |
E | I | R | C | Y | R | G | I | R | H | K | L | G | L | P | V | R | G | Q | R | T | K | N | N | C | R | T | L | K | G |
Template Known Secondary structure |   |
|
|
|
| S |
|
| T | T | T | T | T | T |
|
| S | S | S |
|
| T | T | T |
|
|
| S | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |