Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7S9
Confidence96.88%DateThu Jan 5 11:06:08 GMT 2012
Rank16Aligned Residues53
% Identity23%Templatec1nnjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20. ........30.........40.........50.........60..
Predicted Secondary structure 



...













Query SS confidence 











. . .








































Query Sequence  PDHKHAVIALTS. . . IYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAK
Query Conservation     
 
  

  ...
 


   
  

   

        

  

  
   
  
Alig confidence 











...








































Template Conservation       

  



  








 



 
 


      
       
      
Template Sequence  KSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIE
Template Known Secondary structure  T

SBTSSSSS


TT

TT
BGGG

Template Predicted Secondary structure 





















Template SS confidence 























































   151........160.........170.........180.........190.........200......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions