Return to main results Retrieve Phyre Job Id

Job DescriptionP69054
Confidence9.10%DateThu Jan 5 12:11:14 GMT 2012
Rank17Aligned Residues11
% Identity36%Templatec4a1bB_
PDB info PDB header:ribosomeChain: B: PDB Molecule:rpl39; PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 26s rrna and3 proteins of molecule 3.
Resolution3.52 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.
Predicted Secondary structure 






Query SS confidence 










Query Sequence  MIRNVKKQRPV
Query Conservation     
    

 
Alig confidence 










Template Conservation 
 

 





Template Sequence  FGRKIKQNRPL
Template Known Secondary structure  TTS

Template Predicted Secondary structure 



Template SS confidence 










   13......20...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions