 |
Job Description | P32144 | Confidence | 92.42% | Date | Thu Jan 5 11:49:30 GMT 2012 |
Rank | 270 | Aligned Residues | 111 |
% Identity | 11% | Template | d2gnpa1 |
SCOP info | NagB/RpiA/CoA transferase-like
| NagB/RpiA/CoA transferase-like
| SorC sugar-binding domain-like
|
Resolution | 1.65 |
|
 |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  | . |  |  |
|
|  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | A | I | A | E | A | V | A | D | Y | I | P | D | G | S | T | I | F | I | T | I | G | T | T | V | E | H | V | A | R | A | L | L | N | H | N | H | L | R | I | I | T | N | S | L | R | V | A | H | I | L | Y | H | N | P | R | F | E | V | M | . |
V | P | G | G | T | L | R | S | H | N | S | G | I | I | G | P | S | A | A |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|   | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
Q | V | A | A | G | V | L | R | N | L | I | D | D | N | X | K | I | G | F | S | W | G | K | S | L | S | N | L | V | D | L | I | H | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | S | V | R | N | V | H | F | Y | P | L | A | G | G | P | S | H | I | H | A | K | Y | H | V | N | T | L | I | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| T | T |
|  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
| S | S |
|  |  |  |  | S | B |
|
|
| T | T | S |
| G | G | G | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | F | V | A | D | F | R | A | D | Y | L | V | T | S | V | G | A | I | E | S | D | G | A | L | M | E | F | D | V | N | E | A | N | V | V | K | T | M | M | A | H | A | R | N | I | L | L | V | A |
Query Conservation |   |
  |   |
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
Template Sequence |   |
E | X | S | R | K | F | H | G | E | C | T | F | X | N | A | T | I | V | Q | E | N | K | L | L | A | D | G | I | L | Q | S | R | Y | F | E | N | L | K | N | S | W | K | D | L | D | I | A | V | V |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|  |  |
|
|
|
| S |
| S | B |
| S | S |  |  |  |  |  |  |  |  | T | S | T | T | T |  |  |  |  |  |  | T | T | S |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|