Return to main results Retrieve Phyre Job Id

Job DescriptionP32144
Confidence94.18%DateThu Jan 5 11:49:30 GMT 2012
Rank250Aligned Residues55
% Identity13%Templated2g9wa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.... .....30..... ....40.........50.........60....
Predicted Secondary structure 


.
....





Query SS confidence 














.










. . . .




























Query Sequence  PRHDQLLMLIAERGY. MNIDELANLLD. . . . VSTQTVRRDIRKLSEQGLITRHHGGAGRA
Query Conservation   
   

  
     .
 
 


    ....

  





  

  
 
 
  


   
Alig confidence 














.










....




























Template Conservation    
 


 


      
  

 
 
        


 
 
 

  

 
  

   
  
Template Sequence  DLERAVXDHLWSRTEPQTVRQVHEALSARRDLAYTTVXAVLQRLAKKNLVLQIRAHRYAP
Template Known Secondary structure  T
SS
TTT



TTS


Template Predicted Secondary structure 
















Template SS confidence 



























































   910.........20.........30.........40.........50.........60........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions