Job Description P32144 Confidence 98.21% Date Thu Jan 5 11:49:30 GMT 2012 Rank 21 Aligned Residues 81 % Identity 22% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		T	G	N	P	R	H	D	Q	L	L	M	L	I	A	E	R	G	Y	M	N	I	D	E	L	A	N	L	L	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	.	S	Q	T	E	E	K	K	A
Query Conservation																																																																									.
Alig confidence																																																																									.
Template Conservation
Template Sequence		I	T	D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	K	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	K	T	P	K	Y	Y	Y	S	I	S	S	N	I	L	E	K	I	R	N	D	L	L	N	C	A	K	R	X	E
Template Known Secondary structure																		S												T																T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		86	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		106	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions