Job Description P32144 Confidence 96.39% Date Thu Jan 5 11:49:30 GMT 2012 Rank 157 Aligned Residues 76 % Identity 14% Template d1sd4a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.00

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		P	R	H	D	Q	L	L	M	L	I	A	E	R	G	Y	M	N	I	D	E	L	A	N	L	L	.	.	.	.	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	S	Q	T	E	E	K	K	A
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																											.	.	.
Template Conservation																																																									.	.	.
Template Sequence		X	A	E	W	D	V	X	N	I	I	W	D	K	K	S	V	S	A	N	E	I	V	V	E	I	Q	K	Y	K	E	V	S	D	K	T	I	R	T	L	I	T	R	L	Y	K	K	E	I	I	K	R	Y	K	S	E	.	.	.	N	I	Y	F	Y	S	S	N	I	K	E	D	D	I	K	X	K	T	A	K	T	F
Template Known Secondary structure														S	S	S												T	T	S																	T	T	S							T	.	.	.	T								S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		86	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		87	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions