Job Description P32144 Confidence 90.20% Date Thu Jan 5 11:49:30 GMT 2012 Rank 303 Aligned Residues 79 % Identity 11% Template c4a5mH_ PDB info PDB header:transcription Chain: H: PDB Molecule:uncharacterized hth-type transcriptional regulator yybr; PDBTitle: redox regulator hypr in its oxidized form Resolution 3.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		Q	L	L	M	L	I	A	E	R	G	Y	M	N	I	D	E	L	A	N	L	L	.	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	S	Q	T	E	E	K	K	A	I	A	E	A	V	A	D
Query Conservation																							.
Alig confidence								.															.																								.	.
Template Conservation								.																																							.	.
Template Sequence		I	L	F	Y	H	M	.	I	D	G	K	K	R	F	N	E	F	R	R	I	C	P	S	I	T	Q	R	M	L	T	L	Q	L	R	E	L	E	A	D	G	I	V	H	R	E	.	.	V	Y	H	Q	V	P	P	K	V	E	Y	S	L	T	E	F	G	R	T	L	E	P	I	V	L	Q	M	K	E	W	G	E	S
Template Known Secondary structure								.		T	S											S	T	T	S															T	T	S					.	.			S	S	S	S									T	T	G	G	G	G
Template Predicted Secondary structure								.																																							.	.
Template SS confidence
		30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		93	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		107	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions