Job Description P32144 Confidence 93.80% Date Thu Jan 5 11:49:30 GMT 2012 Rank 260 Aligned Residues 141 % Identity 16% Template c3nzeB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator, sugar-binding family; PDBTitle: the crystal structure of a domain of a possible sugar-binding2 transcriptional regulator from arthrobacter aurescens tc1. Resolution 1.70 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		K	A	I	A	E	A	V	A	D	Y	I	P	D	G	S	T	I	F	I	T	I	G	T	T	V	E	H	V	A	R	A	L	L	N	H	N	H	L	R	I	I	T	N	S	L	R	V	A	H	I	L	Y	H	N	P	R	F	E	V	M	V	P	G	G	T	L	R	.	.	S	H	N	S	G	I	I	G	P	S	A
Query Conservation																																																																					.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	Q	A	A	R	T	I	G	P	L	V	D	S	N	A	I	I	G	V	A	W	G	A	T	L	S	A	V	S	R	H	L	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	X	T	H	D	S	I	V	V	Q	L	N	G	A	G	N	X	Q	T	T	G	I	T	Y	A	S	D	I	X
Template Known Secondary structure									G	G	G			T	T								S								T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S							S					T	T	S		S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		A	S	F	V	A	D	F	R	A	D	Y	L	V	T	S	V	G	A	I	E	S	D	G	A	L	M	E	F	D	V	N	E	A	N	V	V	K	T	M	M	A	H	A	R	N	I	L	L	V	A	D	H	T	K	Y	H	A	S	A	A	V	E	I	G	N	V	A	Q	V	.	.	T	A	L	F	T	D	E	L	P
Query Conservation																																																																							.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	F	G	S	A	Y	G	A	R	V	E	Q	F	P	V	P	A	F	F	D	H	A	S	T	K	T	A	X	W	N	E	R	S	V	Q	R	I	L	D	L	Q	A	R	X	S	I	A	I	.	.	.	.	.	.	.	.	.	.	.	F	G	V	G	S	V	D	S	D	Y	P	S	H	V	Y	A	G	G	Y	L
Template Known Secondary structure									T								S		S	S		S									T	T												T	T		S				.	.	.	.	.	.	.	.	.	.	.								S	S	S	T	T	S			T	T	S	S	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.												.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	A	L	K	S	R	L	Q	D	S	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	H	D	L	T	X	L	A	A	D	D	V
Template Known Secondary structure			G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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