Job Description P32144 Confidence 86.03% Date Thu Jan 5 11:49:30 GMT 2012 Rank 370 Aligned Residues 108 % Identity 14% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	A	E	A	V	A	D	Y	I	P	D	G	S	T	I	F	I	T	I	G	T	T	V	E	H	V	A	R	A	L	L	N	H	N	H	L	R	I	I	T	N	S	L	R	V	A	H	I	L	Y	H	N	P	R	F	E	V	M	V	P	G	G	T	L	R	S	H	N	S	G	I	I	G	P	S	A	A	S
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		A	L	V	S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	Q	G	Q	N	V	A	A	V	A	D	H	A	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	Q	R	N	A	R	F	V	S	A	I	G	G	T	H	I	I	N	.	.	.	A	D	H	I	C	R	R
Template Known Secondary structure														T	T								S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	B		B						.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.																		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	A	D	F	R	A	D	Y	L	V	T	S	V	G	A	I	E	S	D	G	A	L	M	E	F	D	V	N	E	A	N	V	V	K	T	M	M	A	H	A	R	N	I	L	L	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	K	K	Y	G	G	S	S	E	T	L	Y	A	P	A	Y	V	N	D	P	S	L	R	S	A	F	X	E	H	A	T	I	K	E	T	L	S	Q	A	R	K	A	E	F	A	L	V
Template Known Secondary structure							T								S	B	S	B		S	S									T	S												T		S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions