Job Description P32144 Confidence 98.04% Date Thu Jan 5 11:49:30 GMT 2012 Rank 27 Aligned Residues 153 % Identity 16% Template c3cdkD_ PDB info PDB header:transferase Chain: D: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase PDBTitle: crystal structure of the co-expressed succinyl-coa2 transferase a and b complex from bacillus subtilis Resolution 2.59 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.
Predicted Secondary structure																																																					.	.	.																.	.	.
Query SS confidence																																																					.	.	.																.	.	.
Query Sequence		E	E	K	K	A	I	A	E	A	V	A	D	Y	I	P	D	G	S	T	I	F	I	T	I	G	T	T	V	E	H	V	A	R	A	L	L	N	H	N	H	L	R	I	I	T	N	S	L	R	V	A	.	.	.	H	I	L	Y	H	N	P	R	F	E	V	M	V	P	G	.	.	.	G	T	L	R	S	H	N	S
Query Conservation																																																					.	.	.																.	.	.
Alig confidence																											.																										.	.	.																.	.	.
Template Conservation																											.
Template Sequence		E	A	R	K	R	M	V	K	R	A	V	Q	E	I	K	D	G	M	N	V	N	L	G	I	G	.	M	P	T	L	V	A	N	E	I	P	D	G	V	H	V	M	L	Q	S	E	N	G	L	L	G	I	G	P	Y	P	L	E	G	T	E	D	A	D	L	I	N	A	G	K	E	T	I	T	E	V	T	G	A	S
Template Known Secondary structure													T	T			T	T							T	T	.	G	G	G	G	G	G	G	G			T	T								T	T	T										T	T				T	T		B		T	T	S		B
Template Predicted Secondary structure																											.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.			.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																								.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																								.	.
Query Sequence		G	I	I	G	P	S	A	A	S	F	V	A	D	F	R	A	D	Y	L	V	T	S	V	G	A	I	E	S	D	G	A	L	M	E	F	D	V	N	.	.	.	.	.	.	.	.	E	A	N	V	V	K	T	M	M	A	H	A	R	N	I	L	L	V	A	D	H	T	K	.	.	Y	H	A	S	A	A	V	E	I
Query Conservation																																								.	.	.	.	.	.	.	.																								.	.
Alig confidence																																								.	.	.	.	.	.	.	.				.	.	.	.																	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		Y	F	D	S	A	E	S	F	A	M	I	R	G	G	H	I	D	L	A	I	L	G	G	M	E	V	S	E	Q	G	D	L	A	N	W	M	I	P	G	M	V	K	G	M	G	G	A	M	D	.	.	.	.	L	V	N	G	A	K	R	I	V	V	I	M	E	H	V	N	S	K	V	K	K	T	C	S	L	P	L
Template Known Secondary structure														T	T										S				T	T						S										T	T				.	.	.	.						S	S							S					B		S	S			S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	A	Q	V	T	A	L	F	T	D	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	Q	K	V	V	H	R	L	I	T	D	L	A
Template Known Secondary structure		S	B	S	S			S					S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions