Job Description P32144 Confidence 97.86% Date Thu Jan 5 11:49:30 GMT 2012 Rank 41 Aligned Residues 83 % Identity 19% Template c2du9A_ PDB info PDB header:transcription Chain: A: PDB Molecule:predicted transcriptional regulators; PDBTitle: crystal structure of the transcriptional factor from c.glutamicum Resolution 2.28 Å

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		12	.	.	.	.	.	.	.	20	.										.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure												.	.	.	.	.	.	.	.	.					.																																			.
Query SS confidence												.	.	.	.	.	.	.	.	.					.																																			.
Query Sequence		H	D	Q	L	L	M	L	I	A	E	.	.	.	.	.	.	.	.	.	R	G	Y	M	.	N	I	D	E	L	A	N	L	L	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	.	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	S	Q	T
Query Conservation												.	.	.	.	.	.	.	.	.					.																																			.
Alig confidence												.	.	.	.	.	.	.	.	.					.																																			.
Template Conservation
Template Sequence		Y	K	Q	I	A	S	L	I	E	D	S	I	V	D	G	T	L	S	I	D	Q	R	V	P	S	T	N	E	L	A	A	F	H	R	I	N	P	A	T	A	R	N	G	L	T	L	L	V	E	A	G	I	L	Y	K	K	R	G	I	G	X	F	V	S	A	Q	A	P	A	L	I	R	E	R	R	D	A	A	F	A
Template Known Secondary structure															S	S	S	S		T	T													S																	T	T	S					T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	K	K	A	I	A	E	A	V	A	D	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Y	V	A	P	L	I	D	E	S	I	H	L
Template Known Secondary structure					T										T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions