Job Description P32144 Confidence 97.65% Date Thu Jan 5 11:49:30 GMT 2012 Rank 57 Aligned Residues 92 % Identity 20% Template c2dbbA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	L	L	M	L	I	A	E	R	G	Y	M	N	I	D	E	L	A	N	L	L	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	S	Q	T	E	E	K	K	A	I	A	E	A	V	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	L	V	K	I	L	S	E	N	S	R	L	T	Y	R	E	L	A	D	I	L	N	T	T	R	Q	R	I	A	R	R	I	D	K	L	K	K	L	G	I	I	R	K	F	T	I	I	P	D	I	D	K	L	G	Y	M	Y	A	I	V	L	I	K	S	K	V	P	S	D	A	D	K	V	I	S	E	I	S	D
Template Known Secondary structure												T	T										T	T	S																T	S	S									T	G	G	G	T											S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		93	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	P	D	G	S	T	I	F	I	T	I	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	E	Y	V	K	S	V	E	K	G	V	G
Template Known Secondary structure		.		T	T								S	S
Template Predicted Secondary structure		.
Template SS confidence
			92	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions