Job Description P32144 Confidence 96.87% Date Thu Jan 5 11:49:30 GMT 2012 Rank 119 Aligned Residues 94 % Identity 13% Template c1mkmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.																																													.	.	.
Query SS confidence																					.																																													.	.	.
Query Sequence		L	T	G	N	P	R	H	D	Q	L	L	M	L	I	A	E	R	G	Y	.	M	N	I	D	E	L	A	N	L	L	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	.	.	.	N	T	A	F	E	Q	R	E	V	S	Q	T	E
Query Conservation																					.																																													.	.	.
Alig confidence																					.																																													.	.	.
Template Conservation
Template Sequence		M	N	T	L	K	K	A	F	E	I	L	D	F	I	V	K	N	P	G	D	V	S	V	S	E	I	A	E	K	F	N	M	S	V	S	N	A	Y	K	Y	M	V	V	L	E	E	K	G	F	V	L	R	K	K	D	K	R	Y	V	P	G	Y	K	L	I	E	Y	G	S	F	V	L	R	R	F	N	I	R	D	I
Template Known Secondary structure			T	T															S	S		B									T	T																T	T	S					T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	K	A	I	A	E	A	V	A	D	Y	I	P	D	G	S	T	I	F	I
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		A	H	D	H	L	V	D	I	M	K	R	T	.	.	.	G	E	T	V	H	L
Template Known Secondary structure												T	T	.	.	.		S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions