Job Description P32144 Confidence 99.08% Date Thu Jan 5 11:49:30 GMT 2012 Rank 18 Aligned Residues 122 % Identity 18% Template c1j5yA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, biotin repressor family; PDBTitle: crystal structure of transcriptional regulator (tm1602) from2 thermotoga maritima at 2.3 a resolution Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.																																.
Query SS confidence																					.																																.
Query Sequence		T	E	L	T	G	N	P	R	H	D	Q	L	L	M	L	I	A	E	R	.	G	Y	M	N	I	D	E	L	A	N	L	L	D	V	S	T	Q	T	V	R	R	D	I	R	K	L	S	E	Q	G	L	.	I	T	R	H	H	G	G	A	G	R	A	S	S	V	V	N	T	A	F	E	Q	R	E	V	S	Q	T	E
Query Conservation																					.																																.
Alig confidence																					.																																.
Template Conservation
Template Sequence		X	K	T	V	R	Q	E	R	L	K	S	I	V	R	I	L	E	R	S	K	E	P	V	S	G	A	Q	L	A	E	E	L	S	V	S	R	Q	V	I	V	Q	D	I	A	Y	L	R	S	L	G	Y	N	I	V	A	T	P	R	G	Y	V	L	A	G	G	K	S	G	V	S	R	L	V	A	V	K	H	A	P	E
Template Known Secondary structure																					S	S		B										T	S																T							T	T						T	T	T		S											G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																		.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		E	K	K	A	I	A	E	A	V	A	D	Y	I	P	D	G	S	T	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	I	G	T	T	V	E	H	V	A	R	A	L	.	.	L	N	H	N	H	L	R	I	I	T	N	S	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence		.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	I	K	E	E	L	L	C	V	V	R	N	G	G	R	I	V	D	V	I	V	E	H	P	V	Y	G	E	I	R	G	I	I	D	V	S	S	E	E	E	V	L	K	F	V	N	L	X	E	X	A	K	T	E	P	L	L	T	L	S	G	G	V
Template Known Secondary structure		.	.	.	G											T	T											T	T	T											S																S			S	T	T	G	G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions