Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 6 Aligned Residues 214 % Identity 16% Template c3fpkB_ PDB info PDB header:flavoprotein, oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of ferredoxin-nadp reductase from salmonella2 typhimurium Resolution 1.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S	R	D	Y	T	P	L	Y	D	E
Query Conservation
Alig confidence																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	I	.	.	.	.	N	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	R	A	Y	S	Y	V	N	A	P
Template Known Secondary structure																S	S	S											.	.	.	.					T	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S		T
Template Predicted Secondary structure																													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																				.	.	50	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		L	R	H	E	L	A	I	D	F	F	I	H	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	.	.	.	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		D	N	P	N	L	E	F	Y	L	V	T	V	P	Q	G	K	L	S	P	R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	D	A	S	G	F	F	V	L	D	E	V	P	D	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	Y	G	Q	D	V	A	R	F	K	N	L	V
Template Known Secondary structure		T		S	S									T	T		S	S						T			T	T							S	S		B		S		S	G	G	G	S				S								G	G	G	G												S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200																.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V
Query Conservation																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	H	A	A	R	F	A	A	D	L	S	Y	L	P	L	M	L	E	L	Q	Q	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	N	V	P	G	S	L	T	G	R	V	P	A	L	I	E	N	G	E	L	E	K	A	V	G	L	P	M	D	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V
Template Known Secondary structure							S	S	G	G	G		T	T											T	T	T	S								S	S				T	T				S								T	S							T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.								.	.	.	.	.	250	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		K	N	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	R	.	.	.	.	.	.	.	V	R	A	A	A	Y	W
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R	P	G	H	M	T	A	E	H	Y	W
Template Known Secondary structure																B		B	T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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