Job Description Q46871 Confidence 99.65% Date Thu Jan 5 12:35:28 GMT 2012 Rank 57 Aligned Residues 127 % Identity 19% Template c3a1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome b-245 heavy chain; PDBTitle: the crystal structure of nadph binding domain of gp91(phox) Resolution 2.00 Å

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		124	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence													.																																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		L	T	V	A	G	P	R	G	S	L	V	.	V	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	.	.	.	.	.	.	.	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.
Query Conservation													.																																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence													.																																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	V	D	G	P	F	G	T	A	S	E	D	V	F	S	Y	E	V	V	M	L	V	G	A	G	I	G	V	T	P	F	A	S	I	L	K	S	V	W	Y	K	Y	C	N	N	A	T	N	L	K	L	K	K	I	Y	F	Y	W	L	C	R	D	T	H	A	F	E	W	F	A	D	L	L	Q	L	L	E	S	Q
Template Known Secondary structure				T	T	S	T	T	S							T	T	S	S								G	G	G																			T	T														S		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	D	E	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	R	.	.	.	.	.	V	R	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.	.	.	.	.
Template Conservation
Template Sequence		M	Q	E	R	N	N	A	G	F	L	S	Y	N	I	Y	L	T	G	W	Q	K	T	L	Y	G	R	P	N	W	D	N	E	F	K	T	I	A	S	Q	H	P	N	T	R	I	G	V	F	L	C	G	P	E	A	L	A	E	T	L	S	K	Q	S	I	S	N	S	E	S	G	P	R	G	V	H	F	I	F	N	K
Template Known Secondary structure					T	T		T	T	S								T	T							S															S	T	T									S															T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		248	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		184	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions