Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 20 Aligned Residues 227 % Identity 16% Template c2rc5D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: refined structure of fnr from leptospira interrogans Resolution 2.43 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.															.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.								.							.																														.	.	.	.
Template Conservation																																									.							.																														.	.	.	.
Template Sequence		K	S	N	P	Y	K	A	K	V	I	S	N	V	L	L	T	P	E	T	G	T	G	K	R	P	K	K	E	G	E	A	L	V	H	R	I	V	L	A	.	I	D	H	S	A	Y	.	P	Y	V	I	G	Q	S	G	G	V	I	P	P	G	E	D	P	E	K	K	A	K	G	L	A	D	V	G	Y	.	.	.	.
Template Known Secondary structure		T	T	B													S			T	T	S	S	S	S		T	T	S												.			T	T	T		.				T	T								S	S	B								T		S			B		.	.	.	.
Template Predicted Secondary structure																																									.							.																														.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.
Predicted Secondary structure																	.	.	.	.													.	.	.	.	.	.	.	.	.	.																													.	.	.
Query SS confidence																	.	.	.	.													.	.	.	.	.	.	.	.	.	.																													.	.	.
Query Sequence		G	P	R	P	P	S	R	D	Y	T	P	L	Y	D	E	.	.	.	.	L	R	H	E	L	A	I	D	F	F	I	H	.	.	.	.	.	.	.	.	.	.	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	.	.	.	V	P	E	D	Y	A	Y	Q
Query Conservation																	.	.	.	.													.	.	.	.	.	.	.	.	.	.																													.	.	.
Alig confidence		.	.	.	.												.	.	.	.													.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	V	R	L	Y	S	I	A	S	P	S	Y	F	G	M	K	E	D	N	I	E	F	I	I	K	R	D	N	I	Y	D	E	N	G	N	I	Q	F	K	G	V	C	S	N	Y	M	C	D	L	K	P	G	D	E	V	T	M	T	G	P	S	G	K	K	F	L	L	P	N	T	D	F	S	G	D	I
Template Known Secondary structure		.	.	.	.							B		S							S	S											B			B	T	T	T	B		S		B									T			T	T											S	S	S				S	S		B		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.										.	.
Predicted Secondary structure																											.	.	.																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	.	.	.	P	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	D	E	Q	.	.	.	.	.	.	.	.	.	A	V
Query Conservation																											.	.	.																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	F	L	A	T	G	T	G	I	A	P	F	I	G	M	S	E	E	L	L	E	H	K	L	I	K	F	T	G	N	I	T	L	V	Y	G	A	P	Y	S	D	E	L	V	M	M	D	Y	L	K	G	L	E	S	K	H	K	N	F	K	L	I	T	A	I	S	R	E	E	K	N	S	F	D	G	G	R	M	Y	I
Template Known Secondary structure							G	G	G	G												T	T		S	S		B		S									S	S	G	G	G			S												S	S								T	T	T		B		T	T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250
Predicted Secondary structure													.	.	.	.	.												.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.												.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		D	A	R	L	A	Q	M	Q	I	P	A	.	.	.	.	.	D	D	Y	F	I	W	I	T	G	E	G	.	.	.	.	.	K	V	V	K	N	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	.	.	.	.	.	.	.	.	.	R	V	R	A	A	A	Y
Query Conservation													.	.	.	.	.												.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.												.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	R	V	R	E	Q	A	E	A	V	K	K	I	L	N	G	G	G	R	F	Y	I	C	G	G	P	K	G	M	E	K	G	V	I	E	E	I	Q	K	I	S	G	N	T	G	T	Y	E	E	F	K	H	H	L	E	G	A	H	Q	L	F	V	E	T	Y
Template Known Secondary structure								T										T	T								S	S	T	T	T													T			S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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