Job Description Q46871 Confidence 34.11% Date Thu Jan 5 12:35:28 GMT 2012 Rank 86 Aligned Residues 100 % Identity 8% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	D	G	F	N	I	E	W	L	A	H	D	E	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		S	K	E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	.	.	.	.	.	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	V	T	N
Template Known Secondary structure		S	S	S										T	T					.	.	.	.	.					T		T	T									S																	G	G	G	G	S	T	T						S							T	T			S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	A	E	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	D	V	I	I	V	D	S	S	N	F	Y	E	K	I	Y	N	A	L	K	P	N	G	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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