Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 1 Aligned Residues 218 % Identity 29% Template c2gpjA_ PDB info PDB header:fad-binding protein Chain: A: PDB Molecule:siderophore-interacting protein; PDBTitle: crystal structure of a siderophore-interacting protein (sputcn32_0076)2 from shewanella putrefaciens cn-32 at 2.20 a resolution Resolution 2.20 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S	R	D	Y	T	P	L	Y	D	E
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	P	R	E	L	E	V	I	R	S	T	Y	I	T	P	H	X	L	R	I	T	L	G	G	A	G	L	A	G	F	P	A	D	Q	E	S	A	Y	I	K	L	L	F	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	R	P	L	X	R	T	Y	T	I	R	Q	Q	R
Template Known Secondary structure																	T	T								S	G	G	G	T	T			S			T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	H	E	L	A	I	D	F	F	I	H	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S	A	L	V
Query Conservation
Alig confidence																																																																				.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		D	D	E	I	D	V	D	F	V	L	H	D	T	D	G	P	A	S	S	W	A	K	T	A	Q	V	G	E	L	I	Q	I	G	G	P	G	L	K	K	L	I	N	F	E	A	D	W	F	L	L	A	G	D	X	T	A	L	P	A	I	S	V	N	L	A	K	.	.	.	L	P	N	N	A	V	G	Y	A	V	I
Template Known Secondary structure		T	T										S	S													T	T																S	S	S	S								G	G	G											.	.	.	S		T	T
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																					.
Query SS confidence																												.	.	.	.	.																																					.
Query Sequence		S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	D	G	F	N	I	E	W	L	A	H	D	E	.	.	.	.	.	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	.	A	E	Q	Y	D	P	Q	R	V	R	A	A
Query Conservation																												.	.	.	.	.																																					.
Alig confidence																												.	.	.	.	.																																					.
Template Conservation
Template Sequence		E	V	L	S	E	A	D	I	Q	P	L	V	H	P	E	H	V	E	L	H	W	V	I	N	P	E	A	D	P	E	G	R	P	L	V	E	R	I	A	Q	L	P	W	L	A	G	E	P	A	V	W	I	A	C	E	F	N	S	X	R	A	L	R	R	H	F	K	Q	A	H	A	L	P	K	S	H	F	Y	T	S
Template Known Secondary structure				S	S	G	G	G								T										S	S			T	T									T	T	S				S	S																												G	G	G
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		249	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	W	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Y	W	K	I
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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