Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 4 Aligned Residues 215 % Identity 13% Template c2bgjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms Resolution 2.1 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	L	T	V	L	R	V	E	R	I	S	A	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S	R	D	Y	T	P	L	Y	D	E	L	R	H
Query Conservation
Alig confidence																														.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Q	T	V	T	S	V	R	H	W	T	D	T	L	F	S	F	R	V	T	R	P	Q	T	L	R	F	.	.	.	R	S	G	E	F	V	M	I	G	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	G	K	P	I	M	R	A	Y	S	I	A	S	P	A	W	D	E
Template Known Secondary structure														T	T										T	T				.	.	.		T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S											S		T	T		S
Template Predicted Secondary structure																														.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.																			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		E	L	A	I	D	F	F	I	H	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	.	.	.	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S	A	L	V
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.
Template Conservation
Template Sequence		E	L	E	F	Y	S	I	K	V	P	D	G	P	L	T	S	R	L	Q	H	I	K	V	G	E	Q	I	I	L	R	P	K	P	V	G	T	L	V	I	D	A	L	L	P	G	K	R	L	W	F	L	A	T	G	T	G	I	A	P	F	A	S	L	M	R	E	P	E	A	Y	E	K	F	D	E	V	I	M	M	H
Template Known Secondary structure											T	T		T	T					T	T			T	T												S		S	G	G	G	B				S								G	G	G	G							T	T									S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.																.	190	.	.	.	.	.	.	.	.	.	200	.															.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	D	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	C	R	T	V	A	E	L	E	Y	G	R	Q	L	V	E	A	L	Q	E	D	P	L	I	G	E	L	V	E	G	K	L	K	Y	Y	P	T	T	T	R	E	E	F	H	H	M	G	R	I	T	D	N	L	A	S	G	K	V	F	E	D	L	G	I	A	P	M	N	P	E	T	D	R	A	M	V	C	G	S	L
Template Known Secondary structure				S	S	G	G	G	G													S	T	T					T		S									S	S	S			S	S	B	S									S							T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	K	N	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	R	V	R	A	A	A	Y	W	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	N	V	D	V	M	K	V	L	E	S	Y	G	L	R	E	G	A	N	S	E	P	R	E	F	V	V
Template Known Secondary structure														T	T			B			S	S	S		B	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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