Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 18 Aligned Residues 222 % Identity 14% Template c2b5oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: ferredoxin-nadp reductase Resolution 2.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		Y	P	Q	R	V	R	N	D	L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	.	.	.	.	.	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.												.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	V	N	I	Y	R	P	K	T	P	F	L	G	K	C	I	E	N	Y	E	L	V	D	E	G	G	S	G	T	V	R	H	V	T	F	D	I	S	E	.	.	G	D	L	R	Y	L	E	G	Q	S	I	G	I	I	P	P	G	E	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K
Template Known Secondary structure						S	S		S	S	S													S		T	T			S										T	T	.	.	S						T	T								S	S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.																.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.															.	.
Query SS confidence																		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.															.	.
Query Sequence		R	P	P	S	R	D	Y	T	P	L	Y	D	E	L	R	H	.	.	.	.	.	E	L	A	I	D	F	F	I	H	D	.	.	.	.	.	.	.	.	.	.	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	.	D	K	L	T	V	A	G	P	R	G	S	L	V	V	.	.	P	E	D	Y	A	Y	Q	L
Query Conservation																		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.															.	.
Alig confidence																		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.															.															.	.
Template Conservation
Template Sequence		P	H	K	L	R	L	Y	S	I	A	S	T	R	H	G	D	M	E	D	N	K	T	V	S	L	C	V	R	Q	L	E	Y	Q	D	P	E	S	G	E	T	V	Y	G	V	C	S	T	Y	L	C	N	L	P	V	G	T	D	D	V	K	I	T	G	P	V	G	K	E	M	L	L	P	D	D	E	D	A	T	V	V
Template Known Secondary structure										B		S		T	T	T	T	T	T	S	S															T	T	T														T			T	T												S	T	T				S		T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.									.	200	.	.
Predicted Secondary structure																											.	.	.	.	.																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Query Sequence		Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	.	.	.	.	.	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	.	.	.	.	.	.	.	.	D	E	Q	A
Query Conservation																											.	.	.	.	.																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	L	A	T	G	T	G	I	A	P	F	R	A	F	L	W	R	M	F	K	E	Q	H	E	D	Y	K	F	K	G	K	A	W	L	I	F	G	V	P	Y	T	A	N	I	L	Y	K	D	D	F	E	K	M	A	A	E	N	P	D	N	F	R	L	T	Y	A	I	S	R	E	Q	K	T	A	D	G	G	K	V	Y
Template Known Secondary structure						G	G	G	G												T				S	S					S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																								.	.	.	.
Query SS confidence													.	.	.	.	.	.																								.	.	.	.
Query Sequence		V	D	A	R	L	A	Q	M	Q	I	P	.	.	.	.	.	.	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	.	.	.	.	A	E	Q	Y	D	P	Q	R	V
Query Conservation													.	.	.	.	.	.																								.	.	.	.
Alig confidence													.	.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		V	Q	S	R	V	S	E	Y	A	D	E	L	F	E	M	I	Q	K	P	N	T	H	V	Y	M	C	G	L	K	G	M	Q	P	P	I	D	E	T	F	T	A	E	A	E	K	R	G	L	N	W	E	E	M
Template Known Secondary structure									T									T	S	T	T									G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions