Job Description Q46871 Confidence 57.90% Date Thu Jan 5 12:35:28 GMT 2012 Rank 77 Aligned Residues 132 % Identity 10% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	D	G	F	N
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		E	W	L	D	V	Q	P	E	D	R	V	L	D	L	F	C	G	X	G	N	F	T	L	P	L	A	T	Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	.	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D
Template Known Secondary structure					T			T	T							S		T	T	T	T	T						T	T	S	S							S															T	T			.	S								T	T	S			S	S	S	G	G	G	T	T			S
Template Predicted Secondary structure																																																									.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		I	E	W	L	A	H	D	E	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	.	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	R	V	R
Query Conservation																															.
Alig confidence																															.													.
Template Conservation																																												.
Template Sequence		K	V	L	L	D	P	A	R	A	G	A	A	G	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V	S	C	N	P	A	T	L	A	R	D	S	E	A	.	L	L	K	A	G	Y	T	I	A	R	L	A
Template Known Secondary structure									T	T															S							S												.				T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions