Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 11 Aligned Residues 223 % Identity 16% Template c1umkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of human erythrocyte nadh-cytochrome b52 reductase Resolution 1.75 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	P	Q	R	V	R	N	D	L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	P	A	I	T	L	E	S	P	D	I	K	Y	P	L	R	L	I	D	R	E	I	I	S	H	D	T	R	R	F	R	F	A	L	P	S	P	Q	H	I	L	G	L	P	V	G	Q	H	I	Y	L	S	A	R	I	D	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V
Template Known Secondary structure					B	S				T	T														S	S	S									S	S	T	T		B					T	T										T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																				.	90
		86	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.
Predicted Secondary structure									.															.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.															.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	Y	T	P	L	Y	.	D	E	L	R	H	E	L	A	I	D	F	F	I	H	.	.	.	.	.	.	.	.	.	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation									.															.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.															.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	Y	T	P	I	S	S	D	D	D	K	G	F	V	D	L	V	I	K	V	Y	F	K	D	T	H	P	K	F	P	A	G	G	K	M	S	Q	Y	L	E	S	M	Q	I	G	D	T	I	E	F	R	G	P	S	G	L	L	V	Y	Q	G	K	G	K	F	A	I	R	P	D	K	K	S	N	P	I	I	R	T
Template Known Secondary structure							S	S		T	T			S											S	S	S	B	T	T	B	T	T													T	T											S						T	T						S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																		.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	.	A	V	K	P	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	F	N	I	E	W	L	A	H	D	E
Query Conservation																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	K	S	V	G	M	I	A	G	G	T	G	I	T	P	M	L	Q	V	I	R	A	I	M	K	D	P	D	D	H	T	V	C	H	L	L	F	A	N	Q	T	E	K	D	I	L	L	R	P	E	L	E	E	L	R	N	K	H	S	A	R	F	K	L	W	Y	T	L	D	R	A	P	E	A	W	D	Y	G	Q	G
Template Known Secondary structure			S								G	G	G													T		T	T												S	S	G	G	G		T	T												T	T	T								S	S			S	S		S	S			S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		201	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure											.																						.
Query SS confidence											.																						.
Query Sequence		Q	A	V	D	A	R	L	A	Q	.	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	.	L	S	R	R	F	E	A	E	Q	Y	D	P	Q	R	V	R	A
Query Conservation											.																						.
Alig confidence											.																						.
Template Conservation
Template Sequence		F	V	N	E	E	M	I	R	D	H	L	P	P	P	E	E	E	P	L	V	L	M	C	G	P	P	P	M	I	Q	Y	A	C	L	P	N	L	D	H	V	G	H	P	T	E	R	C	F	V
Template Known Secondary structure		S										S			G	G	G								S								T	T								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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