Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 15 Aligned Residues 215 % Identity 16% Template c1fncA_ PDB info PDB header:oxidoreductase (nadp+(a),ferredoxin(a)) Chain: A: PDB Molecule:ferredoxin-nadp+ reductase; PDBTitle: refined crystal structure of spinach ferredoxin reductase2 at 1.7 angstroms resolution: oxidized, reduced, and 2'-3 phospho-5'-amp bound states Resolution 2.00 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		D	L	R	F	R	E	L	T	V	L	R	V	E	R	I	S	A	.	.	.	.	.	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S	R	D	Y
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	T	P	Y	V	G	R	C	L	L	N	T	K	I	T	G	D	D	A	P	G	E	T	W	H	M	V	F	S	H	E	G	E	I	P	Y	.	.	.	R	E	G	Q	S	V	G	V	I	P	D	G	E	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	K	P	H	K	L	R	L	Y
Template Known Secondary structure		T	T	B													S		T	T	S	S	S										T	T					.	.	.		T	T								S	S	B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S		B
Template Predicted Secondary structure																																							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.																.	.	.	.	90	.	.	.	.	.
		89	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure								.	.	.	.	.														.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence								.	.	.	.	.														.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		T	P	L	Y	D	E	.	.	.	.	.	L	R	H	E	L	A	I	D	F	F	I	H	D	.	.	.	.	.	.	.	.	.	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	V	P	E	D	.	.	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P
Query Conservation								.	.	.	.	.														.	.	.	.	.	.	.	.	.																																.	.
Alig confidence								.	.	.	.	.														.	.	.	.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		S	I	A	S	S	A	L	G	D	F	G	D	A	K	S	V	S	L	C	V	K	R	L	I	Y	T	N	D	A	G	E	T	I	K	G	V	C	S	N	F	L	C	D	L	K	P	G	A	E	V	K	L	T	G	P	V	G	K	E	M	L	M	P	K	D	P	N	A	T	I	I	M	L	G	T	G	T	G	I	A
Template Known Secondary structure					S		T	T	T	T	T	T	S	S															T	T	S													T			T	T											S	T	T			B	S		T	T									G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	.	.	.	.	.	Q	V	S	A	L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	D	G	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	W	L	A	H	D	E	Q	A	V	D	A	R	L	A	Q	M	Q
Query Conservation																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	R	S	F	L	W	K	M	F	F	E	K	H	D	D	Y	K	F	N	G	L	A	W	L	F	L	G	V	P	T	S	S	S	L	L	Y	K	E	E	F	E	K	M	K	E	K	A	P	D	N	F	R	L	D	F	A	V	S	R	E	Q	T	N	E	K	G	E	K	M	Y	I	Q	T	R	M	A	Q	Y	A
Template Known Secondary structure												S			B	T	T	B				S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T			B									T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
								212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																												.	.	.	.
Query SS confidence		.	.	.	.	.	.																												.	.	.	.
Query Sequence		.	.	.	.	.	.	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	A	E	.	.	.	.	Q	Y	D	P	Q	R	V	R
Query Conservation		.	.	.	.	.	.																												.	.	.	.
Alig confidence		.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		V	E	L	W	E	M	L	K	K	D	N	T	Y	V	Y	M	C	G	L	K	G	M	E	K	G	I	D	D	I	M	V	S	L	A	A	A	E	G	I	D	W	I	E	Y	K
Template Known Secondary structure								T	T	S	T	T																									T	T	T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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