Job Description Q46871 Confidence 100.00% Date Thu Jan 5 12:35:28 GMT 2012 Rank 19 Aligned Residues 198 % Identity 17% Template c1ep3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit); PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. Resolution 2.10 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		F	R	E	L	T	V	L	R	V	E	R	I	S	A	G	F	Q	R	I	V	L	G	G	E	A	L	D	G	F	T	S	R	G	F	D	D	H	S	K	L	F	F	P	Q	P	D	A	H	F	V	P	P	T	V	T	E	E	G	I	V	W	P	E	G	P	R	P	P	S	R	D	Y	T	P	L	Y	.	D	E	L
Query Conservation																																																																														.
Alig confidence																														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	M	M	T	V	V	S	Q	R	E	V	A	Y	N	I	F	E	M	V	L	K	G	T	L	V	D	E	.	.	M	D	L	P	G	Q	F	L	H	L	A	V	P	N	G	A	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	R	P	I	S	I	S	S	W	D	K	R
Template Known Secondary structure															T	T								S	G	G	G	G	G	.	.			S	T	T								S		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S											T	T
Template Predicted Secondary structure																														.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																				.	.	.	.	.	.	.	.	.	60	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		R	H	E	L	A	I	D	F	F	I	H	D	G	G	V	A	S	G	W	A	M	Q	A	Q	P	G	D	K	L	T	V	A	G	P	R	G	S	L	V	.	.	.	V	P	E	D	Y	A	Y	Q	L	Y	V	C	D	E	S	G	M	P	A	L	R	R	R	L	E	T	L	S	K	L	A	V	K	P	Q	V	S	A
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.																																.	.
Template Conservation																																																																											.	.
Template Sequence		A	K	T	C	T	I	L	Y	R	I	G	D	E	T	T	G	T	Y	K	L	S	K	L	E	S	G	A	K	V	D	V	M	G	P	L	G	N	G	F	P	V	A	E	V	T	S	T	D	K	I	L	I	I	G	G	G	I	G	V	P	P	L	Y	E	L	A	K	Q	L	E	K	T	G	.	.	C	Q	M	T	I
Template Known Secondary structure		T	T											T	T	S							T			T	T										S	B					T	T			T	T	S								G	G	G	S														T	.	.
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		L	V	S	V	R	D	N	A	C	Q	D	Y	L	A	H	L	D	G	F	N	I	E	W	L	A	H	.	.	.	.	.	.	.	.	D	E	Q	A	V	D	A	R	L	A	Q	M	Q	I	P	A	D	D	Y	F	I	W	I	T	G	E	G	K	V	V	K	N	L	S	R	R	F	E	A	E	Q
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.													.	.
Template Conservation																																																.	.
Template Sequence		L	L	G	F	A	S	E	N	V	K	I	L	E	N	E	F	S	N	L	K	N	V	T	L	K	I	A	T	D	D	G	S	Y	G	T	K	G	H	V	G	M	L	M	N	E	I	.	.	D	F	E	V	D	A	L	Y	T	C	G	A	P	A	M	L	K	A	V	A	K	K	Y	D	Q	L	E
Template Known Secondary structure						S	S	G	G	G									T	S	T	T								T	T		S	S	S			S										.	.		S			S						S												T	T	T		S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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